Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 4O7

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 65


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O4 O O1 N N N 0 0.916 2.23 -1.487
2 C25 C C1 R N N 0 -0.229 2.625 -0.764
3 C24 C C2 N N N 0 0.103 3.241 0.586
4 C23 C C3 R N N 0 1.073 2.327 1.344
5 C22 C C4 R N N 0 2.339 2.171 0.495
6 C21 C C5 S N N 0 1.971 1.548 -0.846
7 C26 C C6 N N N 0 3.196 1.674 -1.754
8 N2 N N1 N Y N 0 1.698 0.118 -0.686
9 C18 C C7 N Y N 0 0.456 -0.434 -0.517
10 C19 C C8 N Y N 0 -0.868 0.204 -0.545
11 C6 C C9 N Y N 0 -1.995 -0.579 -0.519
12 C7 C C10 R N N 0 -1.968 -2.079 -0.538
13 C10 C C11 S N N 0 -0.642 -2.661 -0.015
14 C11 C C12 N Y N 0 0.54 -1.789 -0.308
15 C12 C C13 N Y N 0 1.94 -2.116 -0.431
16 C17 C C14 N Y N 0 2.624 -0.894 -0.671
17 C16 C C15 N Y N 0 4.007 -0.876 -0.842
18 C15 C C16 N Y N 0 4.665 -2.092 -0.763
19 C14 C C17 N Y N 0 3.995 -3.281 -0.526
20 C13 C C18 N Y N 0 2.635 -3.331 -0.356
21 C9 C C19 N N N 0 -0.877 -2.718 1.512
22 N1 N N2 N N N 0 -2.311 -3.032 1.672
23 C8 C C20 R N N 0 -3.022 -2.62 0.449
24 O5 O O2 N N N 0 -3.693 -3.743 -0.125
25 C5 C C21 N Y N 0 -3.109 0.338 -0.478
26 C20 C C22 N Y N 0 -2.558 1.648 -0.535
27 C1 C C23 N Y N 0 -3.388 2.766 -0.51
28 C2 C C24 N Y N 0 -4.751 2.536 -0.432
29 C3 C C25 N Y N 0 -5.284 1.259 -0.381
30 C4 C C26 N Y N 0 -4.493 0.137 -0.403
31 N3 N N3 N Y N 0 -1.194 1.533 -0.619
32 O6 O O3 N N N 0 3.269 1.326 1.175
33 C27 C C27 N N N 0 4.168 2.027 2.037
34 N4 N N4 N N N 0 0.452 1.013 1.558
35 C28 C C28 N N N 0 -0.386 1.016 2.764
36 H1 H H1 N N N 0 -0.72 3.405 -1.347
37 H2 H H2 N N N 0 0.567 4.216 0.436
38 H3 H H3 N N N 0 -0.812 3.359 1.167
39 H4 H H4 N N N 0 1.326 2.775 2.305
40 H5 H H5 N N N 0 2.79 3.15 0.331
41 H6 H H6 N N N 0 4.101 1.506 -1.17
42 H7 H H7 N N N 0 3.135 0.934 -2.552
43 H8 H H8 N N N 0 3.225 2.674 -2.188
44 H9 H H9 N N N 0 -2.178 -2.442 -1.544
45 H10 H H10 N N N 0 -0.488 -3.664 -0.411
46 H11 H H11 N N N 0 4.541 0.044 -1.027
47 H12 H H12 N N N 0 5.737 -2.113 -0.891
48 H13 H H13 N N N 0 4.562 -4.199 -0.475
49 H14 H H14 N N N 0 2.122 -4.264 -0.171
50 H15 H H15 N N N 0 -0.266 -3.503 1.959
51 H16 H H16 N N N 0 -0.647 -1.754 1.967
52 H17 H H17 N N N 0 -2.448 -4.015 1.856
53 H19 H H19 N N N 0 -3.743 -1.837 0.686
54 H20 H H20 N N N 0 -4.37 -4.131 0.446
55 H21 H H21 N N N 0 -2.985 3.768 -0.55
56 H22 H H22 N N N 0 -5.422 3.382 -0.41
57 H23 H H23 N N N 0 -6.355 1.142 -0.322
58 H24 H H24 N N N 0 -4.918 -0.854 -0.365
59 H25 H H25 N N N 0 3.6 2.559 2.8
60 H26 H H26 N N N 0 4.841 1.315 2.516
61 H27 H H27 N N N 0 4.75 2.74 1.453
62 H28 H H28 N N N 0 1.151 0.286 1.604
63 H30 H H30 N N N 0 0.228 1.257 3.632
64 H31 H H31 N N N 0 -1.174 1.761 2.658
65 H32 H H32 N N N 0 -0.833 0.031 2.899