data_4O7
#
_chem_comp.id 4O7
_chem_comp.name
;(5S,6R,7R,9R,13cR,14R,16aS)-6-methoxy-5-methyl-7-(methylamino)-6,7,8,9,14,15,16,16a-octahydro-5H,13cH-5,9-epoxy-4b,9a,1
5-triazadibenzo[b,h]cyclonona[1,2,3,4-jkl]cyclopenta[e]-as-indacen-14-ol
;
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C28 H30 N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms staurosporine
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2015-04-27
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 470.563
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 4O7
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4ZHX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
4O7 O4 O1 O 0 1 N N N N N N 164.716 -50.505 64.142 0.916 2.230 -1.487 O4 4O7 1
4O7 C25 C1 C 0 1 N N R N N N 165.447 -51.581 64.750 -0.229 2.625 -0.764 C25 4O7 2
4O7 C24 C2 C 0 1 N N N N N N 166.013 -52.600 63.750 0.103 3.241 0.586 C24 4O7 3
4O7 C23 C3 C 0 1 N N R N N N 165.579 -52.293 62.316 1.073 2.327 1.344 C23 4O7 4
4O7 C22 C4 C 0 1 N N R N N N 164.082 -51.962 62.219 2.339 2.171 0.495 C22 4O7 5
4O7 C21 C5 C 0 1 N N S N N N 163.693 -50.798 63.170 1.971 1.548 -0.846 C21 4O7 6
4O7 C26 C6 C 0 1 N N N N N N 163.702 -49.505 62.353 3.196 1.674 -1.754 C26 4O7 7
4O7 N2 N1 N 0 1 Y N N N N N 162.384 -50.994 63.913 1.698 0.118 -0.686 N2 4O7 8
4O7 C18 C7 C 0 1 Y N N N N N 162.309 -51.988 64.856 0.456 -0.434 -0.517 C18 4O7 9
4O7 C19 C8 C 0 1 Y N N N N N 163.285 -52.124 65.990 -0.868 0.204 -0.545 C19 4O7 10
4O7 C6 C9 C 0 1 Y N N N N N 162.875 -53.037 67.080 -1.995 -0.579 -0.519 C6 4O7 11
4O7 C7 C10 C 0 1 N N R N N N 161.484 -52.843 67.574 -1.968 -2.079 -0.538 C7 4O7 12
4O7 C10 C11 C 0 1 N N S N N N 160.446 -52.478 66.586 -0.642 -2.661 -0.015 C10 4O7 13
4O7 C11 C12 C 0 1 Y N N N N N 160.864 -52.135 65.192 0.540 -1.789 -0.308 C11 4O7 14
4O7 C12 C13 C 0 1 Y N N N N N 160.158 -51.282 64.238 1.940 -2.116 -0.431 C12 4O7 15
4O7 C17 C14 C 0 1 Y N N N N N 161.179 -50.831 63.257 2.624 -0.894 -0.671 C17 4O7 16
4O7 C16 C15 C 0 1 Y N N N N N 160.703 -50.260 62.065 4.007 -0.876 -0.842 C16 4O7 17
4O7 C15 C16 C 0 1 Y N N N N N 159.324 -50.142 61.840 4.665 -2.092 -0.763 C15 4O7 18
4O7 C14 C17 C 0 1 Y N N N N N 158.386 -50.666 62.744 3.995 -3.281 -0.526 C14 4O7 19
4O7 C13 C18 C 0 1 Y N N N N N 158.800 -51.314 63.914 2.635 -3.331 -0.356 C13 4O7 20
4O7 C9 C19 C 0 1 N N N N N N 159.168 -53.026 66.983 -0.877 -2.718 1.512 C9 4O7 21
4O7 N1 N2 N 0 1 N N N N N N 159.478 -53.675 68.267 -2.311 -3.032 1.672 N1 4O7 22
4O7 C8 C20 C 0 1 N N R N N N 160.802 -53.946 68.293 -3.022 -2.620 0.449 C8 4O7 23
4O7 O5 O2 O 0 1 N N N N N N 161.219 -54.131 69.490 -3.693 -3.743 -0.125 O5 4O7 24
4O7 C5 C21 C 0 1 Y N N N N N 164.105 -53.190 67.845 -3.109 0.338 -0.478 C5 4O7 25
4O7 C20 C22 C 0 1 Y N N N N N 165.207 -52.745 66.956 -2.558 1.648 -0.535 C20 4O7 26
4O7 C1 C23 C 0 1 Y N N N N N 166.516 -52.981 67.395 -3.388 2.766 -0.510 C1 4O7 27
4O7 C2 C24 C 0 1 Y N N N N N 166.730 -53.648 68.611 -4.751 2.536 -0.432 C2 4O7 28
4O7 C3 C25 C 0 1 Y N N N N N 165.665 -54.113 69.400 -5.284 1.259 -0.381 C3 4O7 29
4O7 C4 C26 C 0 1 Y N N N N N 164.337 -53.953 68.988 -4.493 0.137 -0.403 C4 4O7 30
4O7 N3 N3 N 0 1 Y N N N N N 164.639 -52.242 65.812 -1.194 1.533 -0.619 N3 4O7 31
4O7 O6 O3 O 0 1 N N N N N N 163.305 -53.154 62.415 3.269 1.326 1.175 O6 4O7 32
4O7 C27 C27 C 0 1 N N N N N N 162.459 -53.471 61.309 4.168 2.027 2.037 C27 4O7 33
4O7 N4 N4 N 0 1 N N N N N N 165.975 -53.342 61.397 0.452 1.013 1.558 N4 4O7 34
4O7 C28 C28 C 0 1 N N N N N N 166.832 -53.020 60.273 -0.386 1.016 2.764 C28 4O7 35
4O7 H1 H1 H 0 1 N N N N N N 166.318 -51.136 65.253 -0.720 3.405 -1.347 H1 4O7 36
4O7 H2 H2 H 0 1 N N N N N N 165.654 -53.603 64.023 0.567 4.216 0.436 H2 4O7 37
4O7 H3 H3 H 0 1 N N N N N N 167.112 -52.577 63.802 -0.812 3.359 1.167 H3 4O7 38
4O7 H4 H4 H 0 1 N N N N N N 166.116 -51.380 62.019 1.326 2.775 2.305 H4 4O7 39
4O7 H5 H5 H 0 1 N N N N N N 163.902 -51.604 61.195 2.790 3.150 0.331 H5 4O7 40
4O7 H6 H6 H 0 1 N N N N N N 163.429 -48.659 63.001 4.101 1.506 -1.170 H6 4O7 41
4O7 H7 H7 H 0 1 N N N N N N 164.708 -49.340 61.939 3.135 0.934 -2.552 H7 4O7 42
4O7 H8 H8 H 0 1 N N N N N N 162.976 -49.586 61.531 3.225 2.674 -2.188 H8 4O7 43
4O7 H9 H9 H 0 1 N N N N N N 161.532 -52.005 68.285 -2.178 -2.442 -1.544 H9 4O7 44
4O7 H10 H10 H 0 1 N N N N N N 160.275 -51.449 66.936 -0.488 -3.664 -0.411 H10 4O7 45
4O7 H11 H11 H 0 1 N N N N N N 161.402 -49.911 61.319 4.541 0.044 -1.027 H11 4O7 46
4O7 H12 H12 H 0 1 N N N N N N 158.975 -49.637 60.951 5.737 -2.113 -0.891 H12 4O7 47
4O7 H13 H13 H 0 1 N N N N N N 157.331 -50.568 62.534 4.562 -4.199 -0.475 H13 4O7 48
4O7 H14 H14 H 0 1 N N N N N N 158.090 -51.824 64.548 2.122 -4.264 -0.171 H14 4O7 49
4O7 H15 H15 H 0 1 N N N N N N 158.418 -52.231 67.111 -0.266 -3.503 1.959 H15 4O7 50
4O7 H16 H16 H 0 1 N N N N N N 158.804 -53.758 66.247 -0.647 -1.754 1.967 H16 4O7 51
4O7 H17 H17 H 0 1 N N N N N N 159.243 -53.063 69.022 -2.448 -4.015 1.856 H17 4O7 52
4O7 H19 H19 H 0 1 N N N N N N 160.977 -54.858 67.704 -3.743 -1.837 0.686 H19 4O7 53
4O7 H20 H20 H 0 1 N N N N N N 160.739 -54.849 69.886 -4.370 -4.131 0.446 H20 4O7 54
4O7 H21 H21 H 0 1 N N N N N N 167.356 -52.652 66.801 -2.985 3.768 -0.550 H21 4O7 55
4O7 H22 H22 H 0 1 N N N N N N 167.743 -53.808 68.950 -5.422 3.382 -0.410 H22 4O7 56
4O7 H23 H23 H 0 1 N N N N N N 165.874 -54.602 70.340 -6.355 1.142 -0.322 H23 4O7 57
4O7 H24 H24 H 0 1 N N N N N N 163.522 -54.404 69.535 -4.918 -0.854 -0.365 H24 4O7 58
4O7 H25 H25 H 0 1 N N N N N N 161.897 -54.391 61.528 3.600 2.559 2.800 H25 4O7 59
4O7 H26 H26 H 0 1 N N N N N N 161.755 -52.644 61.137 4.841 1.315 2.516 H26 4O7 60
4O7 H27 H27 H 0 1 N N N N N N 163.073 -53.623 60.409 4.750 2.740 1.453 H27 4O7 61
4O7 H28 H28 H 0 1 N N N N N N 165.134 -53.731 61.020 1.151 0.286 1.604 H28 4O7 62
4O7 H30 H30 H 0 1 N N N N N N 167.028 -53.931 59.688 0.228 1.257 3.632 H30 4O7 63
4O7 H31 H31 H 0 1 N N N N N N 166.335 -52.274 59.635 -1.174 1.761 2.658 H31 4O7 64
4O7 H32 H32 H 0 1 N N N N N N 167.783 -52.610 60.643 -0.833 0.031 2.899 H32 4O7 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
4O7 C28 N4 SING N N 1
4O7 C27 O6 SING N N 2
4O7 N4 C23 SING N N 3
4O7 C15 C16 DOUB Y N 4
4O7 C15 C14 SING Y N 5
4O7 C16 C17 SING Y N 6
4O7 C22 C23 SING N N 7
4O7 C22 O6 SING N N 8
4O7 C22 C21 SING N N 9
4O7 C23 C24 SING N N 10
4O7 C26 C21 SING N N 11
4O7 C14 C13 DOUB Y N 12
4O7 C21 N2 SING N N 13
4O7 C21 O4 SING N N 14
4O7 C17 N2 SING Y N 15
4O7 C17 C12 DOUB Y N 16
4O7 C24 C25 SING N N 17
4O7 N2 C18 SING Y N 18
4O7 C13 C12 SING Y N 19
4O7 O4 C25 SING N N 20
4O7 C12 C11 SING Y N 21
4O7 C25 N3 SING N N 22
4O7 C18 C11 DOUB Y N 23
4O7 C18 C19 SING N N 24
4O7 C11 C10 SING N N 25
4O7 N3 C19 SING Y N 26
4O7 N3 C20 SING Y N 27
4O7 C19 C6 DOUB Y N 28
4O7 C10 C9 SING N N 29
4O7 C10 C7 SING N N 30
4O7 C20 C1 DOUB Y N 31
4O7 C20 C5 SING Y N 32
4O7 C9 N1 SING N N 33
4O7 C6 C7 SING N N 34
4O7 C6 C5 SING Y N 35
4O7 C1 C2 SING Y N 36
4O7 C7 C8 SING N N 37
4O7 C5 C4 DOUB Y N 38
4O7 N1 C8 SING N N 39
4O7 C8 O5 SING N N 40
4O7 C2 C3 DOUB Y N 41
4O7 C4 C3 SING Y N 42
4O7 C25 H1 SING N N 43
4O7 C24 H2 SING N N 44
4O7 C24 H3 SING N N 45
4O7 C23 H4 SING N N 46
4O7 C22 H5 SING N N 47
4O7 C26 H6 SING N N 48
4O7 C26 H7 SING N N 49
4O7 C26 H8 SING N N 50
4O7 C7 H9 SING N N 51
4O7 C10 H10 SING N N 52
4O7 C16 H11 SING N N 53
4O7 C15 H12 SING N N 54
4O7 C14 H13 SING N N 55
4O7 C13 H14 SING N N 56
4O7 C9 H15 SING N N 57
4O7 C9 H16 SING N N 58
4O7 N1 H17 SING N N 59
4O7 C8 H19 SING N N 60
4O7 O5 H20 SING N N 61
4O7 C1 H21 SING N N 62
4O7 C2 H22 SING N N 63
4O7 C3 H23 SING N N 64
4O7 C4 H24 SING N N 65
4O7 C27 H25 SING N N 66
4O7 C27 H26 SING N N 67
4O7 C27 H27 SING N N 68
4O7 N4 H28 SING N N 69
4O7 C28 H30 SING N N 70
4O7 C28 H31 SING N N 71
4O7 C28 H32 SING N N 72
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
4O7 SMILES ACDLabs 12.01 O1C2n6c4c3n(C1(C(C(C2)NC)OC)C)c8c(c3C7C(c4c5ccccc56)C(NC7)O)cccc8
4O7 InChI InChI 1.03 InChI=1S/C28H30N4O3/c1-28-26(34-3)17(29-2)12-20(35-28)31-18-10-6-4-8-14(18)22-23-16(13-30-27(23)33)21-15-9-5-7-11-19(15)32(28)25(21)24(22)31/h4-11,16-17,20,23,26-27,29-30,33H,12-13H2,1-3H3/t16-,17-,20-,23-,26-,27-,28+/m1/s1
4O7 InChIKey InChI 1.03 FJJCTPAMIAOFJX-VWKRKTLRSA-N
4O7 SMILES_CANONICAL CACTVS 3.385 CN[C@@H]1C[C@H]2O[C@@](C)([C@@H]1OC)n3c4ccccc4c5[C@H]6CN[C@H](O)[C@H]6c7c8ccccc8n2c7c35
4O7 SMILES CACTVS 3.385 CN[CH]1C[CH]2O[C](C)([CH]1OC)n3c4ccccc4c5[CH]6CN[CH](O)[CH]6c7c8ccccc8n2c7c35
4O7 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 C[C@@]12[C@@H]([C@@H](C[C@@H](O1)n3c4ccccc4c5c3-c6n2c7ccccc7c6[C@@H]8[C@H]5[C@H](NC8)O)NC)OC
4O7 SMILES "OpenEye OEToolkits" 1.9.2 CC12C(C(CC(O1)n3c4ccccc4c5c3-c6n2c7ccccc7c6C8C5C(NC8)O)NC)OC
#
_pdbx_chem_comp_identifier.comp_id 4O7
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
(5S,6R,7R,9R,13cR,14R,16aS)-6-methoxy-5-methyl-7-(methylamino)-6,7,8,9,14,15,16,16a-octahydro-5H,13cH-5,9-epoxy-4b,9a,15-triazadibenzo[b,h]cyclonona[1,2,3,4-jkl]cyclopenta[e]-as-indacen-14-ol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
4O7 'Create component' 2015-04-27 RCSB
4O7 'Initial release' 2016-03-09 RCSB
4O7 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id 4O7
_pdbx_chem_comp_synonyms.name staurosporine
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id 4O7
_pdbe_chem_comp_synonyms.name staurosporine
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
4O7 O4 O -1.286 -0.156 1
4O7 C25 C -2.033 -1.457 2
4O7 C24 C -3.533 -1.460 3
4O7 C23 C -4.286 -0.163 4
4O7 C22 C -3.539 1.138 5
4O7 C21 C -2.039 1.141 6
4O7 C26 C -2.238 2.641 7
4O7 N2 N -0.578 1.531 8
4O7 C18 C 0.597 0.599 9
4O7 C19 C 0.601 -0.901 10
4O7 C6 C 1.855 -1.725 11
4O7 C7 C 3.199 -0.895 12
4O7 C10 C 3.195 0.605 13
4O7 C11 C 1.847 1.428 14
4O7 C12 C 1.444 2.873 15
4O7 C17 C -0.055 2.936 16
4O7 C16 C -0.748 4.266 17
4O7 C15 C 0.056 5.532 18
4O7 C14 C 1.554 5.468 19
4O7 C13 C 2.249 4.139 20
4O7 C9 C 4.620 1.072 21
4O7 N1 N 5.505 -0.140 22
4O7 C8 C 4.626 -1.355 23
4O7 O5 O 5.093 -2.781 24
4O7 C5 C 1.459 -3.172 25
4O7 C20 C -0.040 -3.243 26
4O7 C1 C -0.727 -4.576 27
4O7 C2 C 0.083 -5.838 28
4O7 C3 C 1.581 -5.767 29
4O7 C4 C 2.269 -4.434 30
4O7 N3 N -0.570 -1.840 31
4O7 O6 O -4.293 2.435 32
4O7 C27 C -3.546 3.736 33
4O7 N4 N -5.786 -0.167 34
4O7 C28 C -6.533 -1.468 35
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
4O7 C28 N4 SINGLE NONE 1
4O7 C27 O6 SINGLE NONE 2
4O7 C23 N4 SINGLE BEGINWEDGE 3
4O7 C15 C16 SINGLE NONE 4
4O7 C15 C14 DOUBLE NONE 5
4O7 C16 C17 DOUBLE NONE 6
4O7 C22 C23 SINGLE NONE 7
4O7 C22 O6 SINGLE BEGINWEDGE 8
4O7 C22 C21 SINGLE NONE 9
4O7 C23 C24 SINGLE NONE 10
4O7 C21 C26 SINGLE BEGINDASH 11
4O7 C14 C13 SINGLE NONE 12
4O7 C21 N2 SINGLE NONE 13
4O7 C21 O4 SINGLE NONE 14
4O7 C17 N2 SINGLE NONE 15
4O7 C17 C12 SINGLE NONE 16
4O7 C24 C25 SINGLE NONE 17
4O7 N2 C18 SINGLE NONE 18
4O7 C13 C12 DOUBLE NONE 19
4O7 O4 C25 SINGLE NONE 20
4O7 C12 C11 SINGLE NONE 21
4O7 C25 N3 SINGLE NONE 22
4O7 C18 C11 DOUBLE NONE 23
4O7 C18 C19 SINGLE NONE 24
4O7 C11 C10 SINGLE NONE 25
4O7 N3 C19 SINGLE NONE 26
4O7 N3 C20 SINGLE NONE 27
4O7 C19 C6 DOUBLE NONE 28
4O7 C10 C9 SINGLE NONE 29
4O7 C10 C7 SINGLE NONE 30
4O7 C20 C1 SINGLE NONE 31
4O7 C20 C5 DOUBLE NONE 32
4O7 C9 N1 SINGLE NONE 33
4O7 C6 C7 SINGLE NONE 34
4O7 C6 C5 SINGLE NONE 35
4O7 C1 C2 DOUBLE NONE 36
4O7 C7 C8 SINGLE NONE 37
4O7 C5 C4 SINGLE NONE 38
4O7 N1 C8 SINGLE NONE 39
4O7 C8 O5 SINGLE BEGINDASH 40
4O7 C2 C3 SINGLE NONE 41
4O7 C4 C3 DOUBLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
4O7 MurckoScaffold S1 scaffold 'c1ccc2c(c1)c1c3n2C2CCC[C@@H](O2)n2c-3c(c3ccccc32)[C@@H]2CNC[C@H]12' InChI=1S/C25H23N3O/c1-3-8-18-14(6-1)22-16-12-26-13-17(16)23-15-7-2-4-9-19(15)28-21-11-5-10-20(29-21)27(18)24(22)25(23)28/h1-4,6-9,16-17,20-21,26H,5,10-13H2/t16-,17+,20-,21+ MZAXAMGOMAVXBX-ALFLXDJESA-N
4O7 indole F1 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
4O7 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
4O7 pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
4O7 O4 S1 1
4O7 C25 S1 1
4O7 C24 S1 1
4O7 C23 S1 1
4O7 C22 S1 1
4O7 C21 S1 1
4O7 N2 S1 1
4O7 C18 S1 1
4O7 C19 S1 1
4O7 C6 S1 1
4O7 C7 S1 1
4O7 C10 S1 1
4O7 C11 S1 1
4O7 C12 S1 1
4O7 C17 S1 1
4O7 C16 S1 1
4O7 C15 S1 1
4O7 C14 S1 1
4O7 C13 S1 1
4O7 C9 S1 1
4O7 N1 S1 1
4O7 C8 S1 1
4O7 C5 S1 1
4O7 C20 S1 1
4O7 C1 S1 1
4O7 C2 S1 1
4O7 C3 S1 1
4O7 C4 S1 1
4O7 N3 S1 1
4O7 C17 F1 1
4O7 C12 F1 1
4O7 C11 F1 1
4O7 C18 F1 1
4O7 N2 F1 1
4O7 C13 F1 1
4O7 C14 F1 1
4O7 C15 F1 1
4O7 C16 F1 1
4O7 C20 F1 2
4O7 C5 F1 2
4O7 C6 F1 2
4O7 C19 F1 2
4O7 N3 F1 2
4O7 C4 F1 2
4O7 C3 F1 2
4O7 C2 F1 2
4O7 C1 F1 2
4O7 C12 F2 1
4O7 C17 F2 1
4O7 C16 F2 1
4O7 C15 F2 1
4O7 C14 F2 1
4O7 C13 F2 1
4O7 C5 F2 2
4O7 C20 F2 2
4O7 C1 F2 2
4O7 C2 F2 2
4O7 C3 F2 2
4O7 C4 F2 2
4O7 C18 F3 1
4O7 C11 F3 1
4O7 C12 F3 1
4O7 C17 F3 1
4O7 N2 F3 1
4O7 C19 F3 2
4O7 C6 F3 2
4O7 C5 F3 2
4O7 C20 F3 2
4O7 N3 F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id 4O7
_pdbe_chem_comp_rdkit_properties.exactmw 470.232
_pdbe_chem_comp_rdkit_properties.amw 470.573
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 35
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.429
_pdbe_chem_comp_rdkit_properties.NumRings 8
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 7
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 245.519
_pdbe_chem_comp_rdkit_properties.tpsa 72.610
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.227
_pdbe_chem_comp_rdkit_properties.CrippenMR 128.127
_pdbe_chem_comp_rdkit_properties.chi0v 17.014
_pdbe_chem_comp_rdkit_properties.chi1v 10.007
_pdbe_chem_comp_rdkit_properties.chi2v 6.385
_pdbe_chem_comp_rdkit_properties.chi3v 6.385
_pdbe_chem_comp_rdkit_properties.chi4v 5.160
_pdbe_chem_comp_rdkit_properties.chi0n 47.014
_pdbe_chem_comp_rdkit_properties.chi1n 24.809
_pdbe_chem_comp_rdkit_properties.chi2n 6.385
_pdbe_chem_comp_rdkit_properties.chi3n 6.385
_pdbe_chem_comp_rdkit_properties.chi4n 5.160
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.680
_pdbe_chem_comp_rdkit_properties.kappa1 6.598
_pdbe_chem_comp_rdkit_properties.kappa2 6.748
_pdbe_chem_comp_rdkit_properties.kappa3 2.253
_pdbe_chem_comp_rdkit_properties.Phi 1.272
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
4O7 UniChem ZINC ZINC000584904878
4O7 UniChem PubChem 118796339
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
4O7 O4 -1.456 -0.431 -2.102 ETKDGv3 1
4O7 C25 -1.209 -1.653 -1.432 ETKDGv3 2
4O7 C24 -2.389 -2.130 -0.551 ETKDGv3 3
4O7 C23 -3.345 -0.991 -0.154 ETKDGv3 4
4O7 C22 -2.531 0.294 0.060 ETKDGv3 5
4O7 C21 -1.813 0.682 -1.281 ETKDGv3 6
4O7 C26 -2.774 1.502 -2.176 ETKDGv3 7
4O7 N2 -0.589 1.455 -0.988 ETKDGv3 8
4O7 C18 0.710 0.879 -0.762 ETKDGv3 9
4O7 C19 0.989 -0.545 -0.578 ETKDGv3 10
4O7 C6 2.205 -0.968 -0.248 ETKDGv3 11
4O7 C7 3.417 -0.062 -0.112 ETKDGv3 12
4O7 C10 3.044 1.438 -0.002 ETKDGv3 13
4O7 C11 1.664 1.783 -0.529 ETKDGv3 14
4O7 C12 1.031 3.093 -0.528 ETKDGv3 15
4O7 C17 -0.378 2.858 -0.763 ETKDGv3 16
4O7 C16 -1.273 3.842 -0.585 ETKDGv3 17
4O7 C15 -0.765 5.203 -0.264 ETKDGv3 18
4O7 C14 0.555 5.418 -0.089 ETKDGv3 19
4O7 C13 1.515 4.292 -0.194 ETKDGv3 20
4O7 C9 3.173 1.773 1.490 ETKDGv3 21
4O7 N1 3.638 0.579 2.194 ETKDGv3 22
4O7 C8 4.180 -0.331 1.188 ETKDGv3 23
4O7 O5 5.550 -0.074 1.003 ETKDGv3 24
4O7 C5 2.135 -2.426 -0.212 ETKDGv3 25
4O7 C20 0.880 -2.771 -0.454 ETKDGv3 26
4O7 C1 0.495 -4.191 -0.590 ETKDGv3 27
4O7 C2 1.450 -5.129 -0.464 ETKDGv3 28
4O7 C3 2.866 -4.735 -0.217 ETKDGv3 29
4O7 C4 3.203 -3.439 -0.105 ETKDGv3 30
4O7 N3 0.057 -1.627 -0.689 ETKDGv3 31
4O7 O6 -1.573 0.060 1.088 ETKDGv3 32
4O7 C27 -1.701 0.997 2.133 ETKDGv3 33
4O7 N4 -4.090 -1.333 1.074 ETKDGv3 34
4O7 C28 -5.087 -2.380 0.830 ETKDGv3 35
4O7 H1 -1.092 -2.411 -2.237 ETKDGv3 36
4O7 H2 -1.995 -2.625 0.364 ETKDGv3 37
4O7 H3 -2.968 -2.897 -1.110 ETKDGv3 38
4O7 H4 -4.061 -0.809 -0.990 ETKDGv3 39
4O7 H5 -3.255 1.103 0.329 ETKDGv3 40
4O7 H6 -2.201 2.099 -2.918 ETKDGv3 41
4O7 H7 -3.451 2.169 -1.611 ETKDGv3 42
4O7 H8 -3.441 0.819 -2.746 ETKDGv3 43
4O7 H9 4.067 -0.230 -1.000 ETKDGv3 44
4O7 H10 3.792 2.034 -0.570 ETKDGv3 45
4O7 H11 -2.334 3.681 -0.619 ETKDGv3 46
4O7 H12 -1.464 6.023 -0.157 ETKDGv3 47
4O7 H13 0.915 6.409 0.157 ETKDGv3 48
4O7 H14 2.564 4.432 0.033 ETKDGv3 49
4O7 H15 2.203 2.085 1.935 ETKDGv3 50
4O7 H16 3.896 2.609 1.627 ETKDGv3 51
4O7 H17 4.381 0.840 2.885 ETKDGv3 52
4O7 H19 4.044 -1.372 1.555 ETKDGv3 53
4O7 H20 5.924 -0.859 0.523 ETKDGv3 54
4O7 H21 -0.530 -4.474 -0.788 ETKDGv3 55
4O7 H22 1.194 -6.176 -0.559 ETKDGv3 56
4O7 H23 3.629 -5.500 -0.146 ETKDGv3 57
4O7 H24 4.236 -3.151 0.037 ETKDGv3 58
4O7 H25 -1.571 2.036 1.761 ETKDGv3 59
4O7 H26 -2.683 0.887 2.643 ETKDGv3 60
4O7 H27 -0.905 0.804 2.881 ETKDGv3 61
4O7 H28 -4.622 -0.487 1.385 ETKDGv3 62
4O7 H30 -4.590 -3.345 0.596 ETKDGv3 63
4O7 H31 -5.773 -2.096 0.002 ETKDGv3 64
4O7 H32 -5.693 -2.532 1.748 ETKDGv3 65
#