Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 3YM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 28


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAN C CAN N N N 0 -2.597 2.795 -0.169
2 OAM O OAM N N N 0 -3.14 1.474 -0.227
3 CAJ C CAJ N Y N 0 -2.287 0.445 0.02
4 CD2 C CD2 N Y N 0 -0.956 0.7 0.312
5 CAK C CAK N Y N 0 -2.749 -0.867 -0.014
6 OAL O OAL N N N 0 -4.053 -1.123 -0.301
7 CAI C CAI N Y N 0 -1.877 -1.913 0.244
8 CD1 C CD1 N Y N 0 -0.551 -1.651 0.535
9 CG C CG N Y N 0 -0.09 -0.348 0.563
10 CB C CB N N N 0 1.356 -0.068 0.881
11 CA C CA S N N 0 2.17 -0.058 -0.415
12 C C C N N N 0 3.591 0.342 -0.113
13 O O O N N N 0 4.449 -0.503 -0.021
14 N N N N N N 0 2.155 -1.399 -1.014
15 H1 H H1 N N N 0 -2.196 2.98 0.828
16 H11 H H11 N N N 0 -1.799 2.893 -0.905
17 H3 H H3 N N N 0 -3.381 3.52 -0.385
18 H4 H H4 N N N 0 -0.596 1.718 0.344
19 H6 H H6 N N N 0 -2.234 -2.932 0.223
20 H5 H H5 N N N 0 -4.232 -1.244 -1.243
21 H7 H H7 N N N 0 0.128 -2.467 0.736
22 H8 H H8 N N N 0 1.44 0.902 1.37
23 H9 H H9 N N N 0 1.739 -0.844 1.544
24 HA H H10 N N N 0 1.732 0.656 -1.113
25 H H H N N N 0 2.556 -2.079 -0.386
26 HXT H HXT N N Y 0 4.827 1.845 0.246
27 H2 H H2 N N Y 0 1.22 -1.664 -1.285
28 OXT O OXT N N Y 0 3.902 1.637 0.054