Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 1VG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAC C CAC N N N 0 -1.75 1.509 0.006
2 CAB C CAB N N N 0 -3.16 1.62 0.006
3 OAA O OAA N N N 0 -3.71 2.709 0.008
4 CAK C CAK N Y N 0 -3.94 0.366 0.002
5 CAJ C CAJ N Y N 0 -5.333 0.379 0.001
6 CAI C CAI N Y N 0 -6.024 -0.813 -0.003
7 CAH C CAH N Y N 0 -5.339 -2.019 -0.005
8 CAG C CAG N Y N 0 -3.96 -2.045 -0.004
9 CAF C CAF N Y N 0 -3.245 -0.854 0.0
10 OAE O OAE N N N 0 -1.895 -0.857 0.0
11 CAD C CAD N N N 0 -1.175 0.276 -0.002
12 CAL C CAL N Y N 0 0.298 0.18 -0.002
13 CAQ C CAQ N Y N 0 0.917 -1.074 0.002
14 CAP C CAP N Y N 0 2.29 -1.162 0.002
15 CAM C CAM N Y N 0 1.074 1.342 -0.01
16 CAN C CAN N Y N 0 2.447 1.252 -0.009
17 CAO C CAO N Y N 0 3.065 -0.001 0.0
18 CAR C CAR N Y N 0 4.541 -0.097 0.001
19 NAV N NAV N Y N 0 5.28 -1.232 0.01
20 NAU N NAU N Y N 0 6.52 -0.875 0.007
21 NAT N NAT N Y N 0 6.588 0.41 -0.002
22 NAS N NAS N Y N 0 5.399 0.906 -0.012
23 H1 H H1 N N N 0 -1.134 2.396 0.009
24 H3 H H3 N N N 0 -5.868 1.317 0.003
25 H4 H H4 N N N 0 -7.104 -0.809 -0.003
26 H5 H H5 N N N 0 -5.89 -2.947 -0.008
27 H6 H H6 N N N 0 -3.437 -2.989 -0.006
28 H8 H H8 N N N 0 0.317 -1.972 0.004
29 H9 H H9 N N N 0 2.768 -2.131 0.005
30 H10 H H10 N N N 0 0.596 2.311 -0.017
31 H11 H H11 N N N 0 3.047 2.149 -0.016
32 H12 H H12 N N N 0 4.942 -2.141 0.017