Sample Instance

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{
    "data": {
        "type": "samples",
        "id": "SRS842600",
        "attributes": {
            "latitude": null,
            "longitude": null,
            "sample-metadata": [
                {
                    "key": "geographic location (longitude)",
                    "value": "19.47 S 47.06 E",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "Madagascar: Antsirabe",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2012-02-15",
                    "unit": null
                },
                {
                    "key": "relationship to oxygen",
                    "value": "aerobe",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "Soil DNA extraction",
                    "unit": null
                },
                {
                    "key": "sample material processing",
                    "value": "density gradient separation of light-DNA and Heavy-DNA fractions (DNA-SIP)",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "410658",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX Titanium",
                    "unit": null
                },
                {
                    "key": "isolation source",
                    "value": "soil",
                    "unit": null
                },
                {
                    "key": "sample size",
                    "value": "about 1 g of soil",
                    "unit": null
                }
            ],
            "biosample": "SAMN03339053",
            "accession": "SRS842600",
            "analysis-completed": "2016-05-13",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "This sample is part of an incubation experiment where tropical soil was incubated in laboratory amended or not with 13C labelled wheat straw and in the presence of three earthworm species (Pontoscolex corethrurus, Kynotus parvus and Dichogaster saliens). DNA has been extracted from soil or from earthworm casts and DNA-SIP approach allowed to separate DNA from bacteria fed on the labelled-straw (Heavy DNA fraction) vs bacteria fed on soil organic matter (Light DNA fraction). This biosample corresponds to the heavy DNA fraction of the straw-amended soil (without earthworm).",
            "environment-biome": null,
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "Bacterial sequences composition of the heavy DNA fraction isolated from the 13C-straw amended soil treatment",
            "sample-alias": "Primevers-ST-HF",
            "host-tax-id": null,
            "species": null,
            "last-update": "2016-05-13T14:18:34"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Terrestrial:Soil"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS842600/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000933",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000933?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS842600/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS842600?format=api"
        }
    }
}