GET /metagenomics/api/v1/samples/SRS659506?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "SRS659506",
        "attributes": {
            "biosample": "SAMN02899766",
            "longitude": -109.09,
            "latitude": 27.33,
            "sample-metadata": [
                {
                    "key": "total nitrogen",
                    "value": "0.46",
                    "unit": null
                },
                {
                    "key": "total organic carbon",
                    "value": "8.47",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "-109.09",
                    "unit": null
                },
                {
                    "key": "geographic location (depth)",
                    "value": "0-20 cm",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "Mexico: Ciudad Obregon, Sonora",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2012-10",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "Agricultural soil",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "Long-term experimental site",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "Soil",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "MIMS.me;MIGS/MIMS/MIMARKS.soil",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "Auger",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "0-20 cm",
                    "unit": null
                },
                {
                    "key": "elevation",
                    "value": "38 m.a.s.l.",
                    "unit": null
                },
                {
                    "key": "pH",
                    "value": "8.83",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "27.33",
                    "unit": null
                },
                {
                    "key": "history/agrochemical additions",
                    "value": "0 kg N-Urea ha-1",
                    "unit": null
                },
                {
                    "key": "mean annual and seasonal precipitation",
                    "value": "320 mm",
                    "unit": null
                },
                {
                    "key": "mean annual and seasonal temperature",
                    "value": "24 Celsius",
                    "unit": null
                },
                {
                    "key": "history/crop rotation",
                    "value": "wheat-maize",
                    "unit": null
                },
                {
                    "key": "current land use",
                    "value": "agricultural soil",
                    "unit": null
                },
                {
                    "key": "pH method",
                    "value": "H2O extracts",
                    "unit": null
                },
                {
                    "key": "pooling of DNA extracts (if done)",
                    "value": "double",
                    "unit": null
                },
                {
                    "key": "soil type",
                    "value": "Hyposodic Vertisol",
                    "unit": null
                },
                {
                    "key": "soil type method",
                    "value": "World Reference Base System",
                    "unit": null
                },
                {
                    "key": "storage conditions (fresh/frozen/other)",
                    "value": "- 20 Celsius",
                    "unit": null
                },
                {
                    "key": "history/tillage",
                    "value": "Permanent beds",
                    "unit": null
                },
                {
                    "key": "total N method",
                    "value": "Kjeldahl",
                    "unit": null
                },
                {
                    "key": "total organic C method",
                    "value": "Combustion and infrared analysis",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "410658",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX Titanium",
                    "unit": null
                },
                {
                    "key": "sample size",
                    "value": "2 kg",
                    "unit": null
                }
            ],
            "accession": "SRS659506",
            "analysis-completed": "2016-06-06",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "Long-term experimental site Permanent beds with burned crop residues Plot3 Bed6",
            "environment-biome": "Agricultural soil",
            "environment-feature": "Long-term experimental site",
            "environment-material": "Soil",
            "sample-name": "PB-Burning Plot3 Bed6",
            "sample-alias": "PB-Burning Plot3 Bed6",
            "host-tax-id": null,
            "species": null,
            "last-update": "2024-04-09T19:25:43"
        },
        "relationships": {
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS659506/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000998",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000998?format=api"
                        }
                    }
                ]
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Terrestrial:Soil:Agricultural"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Agricultural?format=api"
                }
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS659506/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS659506?format=api"
        }
    }
}