GET /metagenomics/api/v1/samples/SRS577852?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "SRS577852",
        "attributes": {
            "longitude": -53.0,
            "biosample": "SAMN02628418",
            "latitude": 7.29,
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "28.85",
                    "unit": null
                },
                {
                    "key": "turbidity",
                    "value": "1.12",
                    "unit": "NTU"
                },
                {
                    "key": "investigation type",
                    "value": "metagenome",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "-53.0",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "Atlantic Ocean:Western Tropical North Atlantic Ocean",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2010-05-26",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "surface seawater",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "sequencing method",
                    "value": "Illumina PE 150x150",
                    "unit": null
                },
                {
                    "key": "bacterial carbon production",
                    "value": "139.68",
                    "unit": "pmol leu/L/hr"
                },
                {
                    "key": "density",
                    "value": "1018.98",
                    "unit": "kgm-2"
                },
                {
                    "key": "depth",
                    "value": "3.76",
                    "unit": null
                },
                {
                    "key": "dissolved inorganic carbon",
                    "value": "1846",
                    "unit": "µmol/kg"
                },
                {
                    "key": "dissolved oxygen",
                    "value": "188.26",
                    "unit": "µmol/kg"
                },
                {
                    "key": "pressure",
                    "value": "3.78",
                    "unit": "Db"
                },
                {
                    "key": "salinity",
                    "value": "30.8",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "7.29",
                    "unit": null
                },
                {
                    "key": "volume of sample",
                    "value": "10.4",
                    "unit": "L"
                },
                {
                    "key": "NCBI sample classification",
                    "value": "1169740",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina Genome Analyzer IIx",
                    "unit": null
                },
                {
                    "key": "sampling cruise",
                    "value": "R/V Knorr, May-June 2010",
                    "unit": null
                },
                {
                    "key": "sampling site",
                    "value": "Station 3",
                    "unit": null
                },
                {
                    "key": "minimum filter size",
                    "value": "2.0",
                    "unit": "µm"
                },
                {
                    "key": "maximum filter size",
                    "value": "156",
                    "unit": "µm"
                },
                {
                    "key": "oxygen saturation",
                    "value": "94.43",
                    "unit": "%"
                },
                {
                    "key": "fluorescence",
                    "value": "0.28 mgm-3",
                    "unit": null
                },
                {
                    "key": "collection time",
                    "value": "1000",
                    "unit": null
                },
                {
                    "key": "photosynthetically active radiation",
                    "value": "65.38",
                    "unit": "µEm-2sec-1"
                },
                {
                    "key": "potential density",
                    "value": "18.97",
                    "unit": null
                }
            ],
            "accession": "SRS577852",
            "analysis-completed": "2014-05-09",
            "collection-date": "2010-05-26",
            "geo-loc-name": "Western Tropical North Atlantic Ocean",
            "sample-desc": "This sample has been submitted by pda|brando02345 on 2014-03-21; aquatic metagenome",
            "environment-biome": "surface seawater",
            "environment-feature": "Amazon river plume",
            "environment-material": "surface seawater",
            "sample-name": "ACM41",
            "sample-alias": "ACM41",
            "host-tax-id": null,
            "species": null,
            "last-update": "2021-10-11T14:38:31"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine:Oceanic"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS577852/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000382",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000382?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00005810",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005810?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS577852/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS577852?format=api"
        }
    }
}