GET /metagenomics/api/v1/samples/SRS503414?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "SRS503414",
        "attributes": {
            "biosample": "SAMN02404694",
            "longitude": -43.6833,
            "sample-metadata": [
                {
                    "key": "project name",
                    "value": "Eucaleg",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "-43.68333333333333",
                    "unit": null
                },
                {
                    "key": "geographic location (depth)",
                    "value": "0-10cm",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "SeropŽdica, RJ",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "dez/17",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "Eucalyptus plantation located at a region originally with Brazilian Atlantic Florest",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "Superficial Soil (0-10cm)",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "Soil",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "Generic",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "sterilized soil probe",
                    "unit": null
                },
                {
                    "key": "sample material processing",
                    "value": "The five subsamples were homogenized with the utilization of a sterile bottle of glass to make a composite sample. Subsamples from each composite sample were immediately placed in centrifuge tubes in the field and were stored in liquid nitrogen",
                    "unit": null
                },
                {
                    "key": "altitude",
                    "value": "0.0",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "0-10cm",
                    "unit": null
                },
                {
                    "key": "elevation",
                    "value": "33m",
                    "unit": null
                },
                {
                    "key": "pH",
                    "value": "5.3",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "-22.766666666666666",
                    "unit": null
                },
                {
                    "key": "mean annual and seasonal precipitation",
                    "value": "1,250 mm",
                    "unit": null
                },
                {
                    "key": "mean annual and seasonal temperature",
                    "value": "16?C (June and July) to 32?C (January to March)",
                    "unit": null
                },
                {
                    "key": "current land use",
                    "value": "Forestry with Eucalyptus plantation",
                    "unit": null
                },
                {
                    "key": "current vegetation",
                    "value": "Eucalyptus urograndis trees",
                    "unit": null
                },
                {
                    "key": "drainage classification",
                    "value": "well",
                    "unit": null
                },
                {
                    "key": "history/extreme events",
                    "value": "none known",
                    "unit": null
                },
                {
                    "key": "history/fire",
                    "value": "no in the last three years, at least",
                    "unit": null
                },
                {
                    "key": "history/flooding",
                    "value": "no",
                    "unit": null
                },
                {
                    "key": "pH method",
                    "value": "1:10 soil:water ratio solution",
                    "unit": null
                },
                {
                    "key": "history/previous land use",
                    "value": "grasses of natural occurrence",
                    "unit": null
                },
                {
                    "key": "composite design/sieving (if any)",
                    "value": "no",
                    "unit": null
                },
                {
                    "key": "soil type",
                    "value": "Haplic Planosol",
                    "unit": null
                },
                {
                    "key": "texture",
                    "value": "sandy topsoil (~90% sand)",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "410658",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX Titanium",
                    "unit": null
                }
            ],
            "latitude": -22.7667,
            "accession": "SRS503414",
            "analysis-completed": "2016-05-03",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "Soil 28S metagenome, under Eucalyptus plantation with 3 yr old.",
            "environment-biome": "Eucalyptus plantation located at a region originally with Brazilian Atlantic Florest",
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "Fungi_Eucalyptus8",
            "sample-alias": "Fungi_Eucalyptus8",
            "host-tax-id": null,
            "species": null,
            "last-update": "2024-04-11T08:08:03"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Terrestrial:Soil"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS503414/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000814",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000814?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS503414/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS503414?format=api"
        }
    }
}