GET /metagenomics/api/v1/samples/SRS396702?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "SRS396702",
        "attributes": {
            "longitude": null,
            "biosample": "SAMN01922111",
            "latitude": null,
            "sample-metadata": [
                {
                    "key": "total organic carbon",
                    "value": "2.78",
                    "unit": null
                },
                {
                    "key": "investigation type",
                    "value": "metagenome",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "microbial diversity of Fonti della Gaverina",
                    "unit": null
                },
                {
                    "key": "geographic location (depth)",
                    "value": "5-10 cm",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2009-05-06",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "soil",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "semi-natural meadow",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "soil",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "MIMS.me;MIGS/MIMS/MIMARKS.soil",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "5-10 cm",
                    "unit": null
                },
                {
                    "key": "elevation",
                    "value": "97.0",
                    "unit": null
                },
                {
                    "key": "pH",
                    "value": "6.92",
                    "unit": null
                },
                {
                    "key": "history/agrochemical additions",
                    "value": "no",
                    "unit": null
                },
                {
                    "key": "history/crop rotation",
                    "value": "no",
                    "unit": null
                },
                {
                    "key": "current land use",
                    "value": "meadows (grasses,alfalfa,fescue,bromegrass,timothy)",
                    "unit": null
                },
                {
                    "key": "current vegetation",
                    "value": "mixture of perenial legumes with grasses",
                    "unit": null
                },
                {
                    "key": "current vegetation method",
                    "value": "support of natural vegetation and sowing of mixture of legumes and grasses every 5 years",
                    "unit": null
                },
                {
                    "key": "history/flooding",
                    "value": "no",
                    "unit": null
                },
                {
                    "key": "horizon",
                    "value": "a horizon",
                    "unit": null
                },
                {
                    "key": "history/previous land use",
                    "value": "constant land use since early records (first reports dating back to 12-13 century AC mention the reclamation of the lands (former swamp) for the current land use)",
                    "unit": null
                },
                {
                    "key": "sample weight for DNA extraction",
                    "value": "0.5 g",
                    "unit": null
                },
                {
                    "key": "composite design/sieving (if any)",
                    "value": "2 mm mesh",
                    "unit": null
                },
                {
                    "key": "texture",
                    "value": "Loam",
                    "unit": null
                },
                {
                    "key": "total N",
                    "value": "0.298962",
                    "unit": null
                },
                {
                    "key": "water content of soil",
                    "value": "20",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "410658",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina HiSeq 2000",
                    "unit": null
                },
                {
                    "key": "sample collection device",
                    "value": "auger",
                    "unit": null
                }
            ],
            "accession": "SRS396702",
            "analysis-completed": "2016-04-19",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "Keywords: GSC:MIxS MIMS:5.0",
            "environment-biome": "soil",
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "arch_me3",
            "sample-alias": "arch_me3",
            "host-tax-id": null,
            "species": null,
            "last-update": "2024-01-23T11:55:23"
        },
        "relationships": {
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS396702/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000736",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000736?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS396702/runs?format=api"
                }
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Terrestrial:Soil"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS396702?format=api"
        }
    }
}