GET /metagenomics/api/v1/samples/SRS359804?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"data": {
"type": "samples",
"id": "SRS359804",
"attributes": {
"latitude": null,
"longitude": null,
"biosample": "SAMN01137337",
"sample-metadata": [
{
"key": "NCBI sample classification",
"value": "410658",
"unit": null
},
{
"key": "instrument model",
"value": "454 GS FLX Titanium",
"unit": null
}
],
"accession": "SRS359804",
"analysis-completed": "2016-05-03",
"collection-date": null,
"geo-loc-name": null,
"sample-desc": "Poor Agricultural Practices Pergamino Buenos Aires Argentin Name Units Value depth m 0-0.1 elev m 65 alt N/A sieving Soil sample composed by 16-20 randomly selected subsamples, homogenized in the field, 10-15 g sieved through 2-mm mesh in the lab. cur_land_use row crops cur_vegetation_meth Field observation cur_vegetation Soybean stubble drainage_class well al_sat_meth N/D al_sat N/D heavy_metals_meth N/D heavy_metals N/D salinity_meth N/D extreme_salinity N/D agrochem_addition Liters of low-toxicity herbicides plus liters of moderate-toxicity herbicides weighted by two (Toxicity defined according to EPA Toxicity Categories). Average for the last 5 years (2005-2009): 46,5 L crop_rotation Last 5 years rotations: Soybean; Soybean; Soybean; Soybean; Soybean extreme_event No fire No flooding No previous_land_use_meth Surveys to landowners previous_land_use row crops/cattle raising tillage No tillage horizon_meth Field observation horizon A horizon link_class_info http://geointa.inta.gov.ar/visor/?p=model_suelos link_climate_info http://inta.gob.ar/documentos/atlas-climatico-digital-de-la-republica-argentina-1/ link_addit_analys annual_season_precpt mm 1000 annual_season_temp ºC 16 microbial_biomass_meth microbial_biomass misc_param other ph_meth Potentiometric method, soil–water relationship 1:2.13 ph 5.7 pool_dna_extracts No profile_position Toeslope sample_size g 500 samp_weight_dna_ext g 0.5 slope_aspect N/A slope_gradient 0.5 soil_type_meth INTA soil map (http://geointa.inta.gov.ar/visor/?p=model_suelos) soil_type Typic Argiudoll fao_class Luvic Phaeozem local_class_meth INTA soil map (http://geointa.inta.gov.ar/visor/?p=model_suelos) local_class Typic Argiudoll store_cond texture_meth INTA soil map (http://geointa.inta.gov.ar/visor/?p=model_suelos) texture Silt loam tot_n_meth Dry combustion using a LECO CN analyzer tot_n % 0.136 tot_org_c_meth Dry combustion using a LECO CN analyzer tot_org_carb % 1.8 water_content_soil_meth water_content_soil N/A: Not applicable N/D: Not determined Cabrera, A. L., “Regiones fitogeográficas argentinas”, Enciclopedia Argentina de agricultura y jardinería, Buenos Aires, Editorial ACME S.A.I.C., 1976, 85 pp. ",
"environment-biome": null,
"environment-feature": null,
"environment-material": null,
"sample-name": "Poor Agricultural Practices Pergamino Buenos Aires Argentin",
"sample-alias": "MPPE-F11-R11",
"host-tax-id": null,
"species": null,
"last-update": "2016-05-03T21:47:20"
},
"relationships": {
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
}
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS359804/runs?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS359804/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00000803",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000803?format=api"
}
}
]
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS359804?format=api"
}
}
}