Sample Instance

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "SRS2235643",
        "attributes": {
            "biosample": "SAMN07172545",
            "longitude": 32.2659,
            "sample-metadata": [
                {
                    "key": "geographic location (longitude)",
                    "value": "32.26585",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "Egypt",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2016-01-01/2016-12-31",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "30.58923",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina MiSeq",
                    "unit": null
                },
                {
                    "key": "host scientific name",
                    "value": "Homo sapiens",
                    "unit": null
                }
            ],
            "latitude": 30.5892,
            "accession": "SRS2235643",
            "analysis-completed": "2018-03-01",
            "collection-date": "2016-01-01",
            "geo-loc-name": "Egypt",
            "sample-desc": "Bacterial diversity in endodontic infections has not been sufficiently studied. About half of oral bacteria are as yet uncultured and culture-independent methods have been successfully used to describe the oral bacterial community. The use of modern pyrosequencing technology should allow more comprehensive analysis than traditional Sanger sequencing. . The microbiome was characterized on the basis of the V3 and V4 hypervariable region of the 16S rRNA gene by using paired-end sequencing on Illumina MiSeq device.",
            "environment-biome": null,
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "Metagenome or environmental sample from human oral metagenome",
            "sample-alias": "oral endodontic_2",
            "host-tax-id": 9606,
            "species": "Homo sapiens",
            "last-update": "2018-03-01T09:15:06"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Human:Digestive system:Oral"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Human:Digestive%20system:Oral?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS2235643/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00002276",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002276?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS2235643/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS2235643?format=api"
        }
    }
}