Sample Instance

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{
    "data": {
        "type": "samples",
        "id": "SRS1666366",
        "attributes": {
            "latitude": null,
            "longitude": null,
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "-80C",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "NA",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "USA:Michigan",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "08-Feb-2015",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "mouse",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "gut",
                    "unit": null
                },
                {
                    "key": "host taxid",
                    "value": "Taxonomy ID: 10090",
                    "unit": null
                },
                {
                    "key": "host color",
                    "value": "Black",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "410661",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina MiSeq",
                    "unit": null
                },
                {
                    "key": "sample_title",
                    "value": "High fat+Calcium - Male_1C",
                    "unit": null
                },
                {
                    "key": "host age",
                    "value": "85 wks",
                    "unit": null
                },
                {
                    "key": "host diet",
                    "value": "High fat 20% fat + Calcium 5.25 g/kg diet",
                    "unit": null
                },
                {
                    "key": "host phenotype",
                    "value": "\"Hepatic Steatosis, NAS 5\"",
                    "unit": null
                },
                {
                    "key": "host sex",
                    "value": "male",
                    "unit": null
                },
                {
                    "key": "host",
                    "value": "Mus musculus",
                    "unit": null
                },
                {
                    "key": "organism",
                    "value": "mouse gut metagenome",
                    "unit": null
                },
                {
                    "key": "env_material",
                    "value": "Cecal tip with contents",
                    "unit": null
                },
                {
                    "key": "BioSampleModel",
                    "value": "MIMARKS.survey,MIGS/MIMS/MIMARKS.host-associated",
                    "unit": null
                },
                {
                    "key": "host_tissue_sampled",
                    "value": "Cecal tip with contents",
                    "unit": null
                },
                {
                    "key": "seq_methods",
                    "value": "Illumina MiSeq",
                    "unit": null
                },
                {
                    "key": "description",
                    "value": "bacterial V4 16S rRNA-encoding gene sequences",
                    "unit": null
                }
            ],
            "biosample": "SAMN05727176",
            "accession": "SRS1666366",
            "analysis-completed": "2017-02-15",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "bacterial V4 16S rRNA-encoding gene sequences",
            "environment-biome": null,
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "High fat+Calcium - Male_1C",
            "sample-alias": "CA_46",
            "host-tax-id": 10090,
            "species": "Mus musculus",
            "last-update": "2017-02-15T14:22:45"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Mammals:Digestive system:Large intestine:Cecum"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Mammals:Digestive%20system:Large%20intestine:Cecum?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS1666366/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001498",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001498?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS1666366/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS1666366?format=api"
        }
    }
}