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{
"data": {
"type": "samples",
"id": "SRS121012",
"attributes": {
"biosample": "SAMN00120089",
"longitude": null,
"latitude": null,
"sample-metadata": [
{
"key": "geographic location (country and/or sea,region)",
"value": "USA",
"unit": null
},
{
"key": "environment (biome)",
"value": "Artificial biome",
"unit": null
},
{
"key": "environment (feature)",
"value": "Artificial feature",
"unit": null
},
{
"key": "environment (material)",
"value": "Artificial material",
"unit": null
},
{
"key": "alt id - submitted sample id",
"value": "HM-279D Staggered, Low Concentration community",
"unit": null
},
{
"key": "GOLD sample classification",
"value": "Engineered > Modeled > Simulated communities (DNA mixture) > Unclassified > Unclassified",
"unit": null
},
{
"key": "instrument model",
"value": "454 GS FLX Titanium",
"unit": null
}
],
"accession": "SRS121012",
"analysis-completed": "2012-04-03",
"collection-date": null,
"geo-loc-name": "USA",
"sample-desc": "A genomic DNA mixture from 22 bacterial strains containing ribosomal RNA operon counts that vary by up to four orders of magnitude per organism (Staggered). Pooled DNA from (Organism (strain#)-Target 16S copies in PCR: Acinetobacter baumanii (ATCC 17978)-10000, Actinomyces odontolyticus (ATCC 17982)-1000, Bacillus cereus (ATCC 10987)-100000, Bacteroides vulgatus (ATCC 8482)-1000, Candida albicans (SC5314)-1000, Clostridium beijerinckii (ATCC 51743)-100000, Deinococcus radiodurans (DSM 20539)-1000, Enterococcus faecalis (ATCC 47077)-1000, Escherichia coli (ATCC 70096)-1000000, Helicobacter pylori (ATCC 700392)-10000, Lactobacillus gasseri (DSM 20243)-10000, Listeria monocytogenes (ATCC BAA-679)-10000, Methanobrevibacter smithii (ATCC 35061)-1000000, Neisseria meningitidis (ATCC BAA-335)-10000, Propionibacterium acnes (DSM 16379)-10000, Pseudomonas aeruginosa (ATCC 47085)-100000, Rhodobacter sphaeroides (ATCC 17023)-1000000, Staphylococcus aureus (ATCC BAA-1718)-100000, Staphylococcus epidermidis (ATCC 12228)-1000000, Streptococcus agalactiae (ATCC BAA-611)-100000, Streptococcus mutans (ATCC 700610)-1000000, Streptococcus pneumoniae (ATCC BAA-334)-1000) at staggered concentrations, over 5 orders of magnitute on genomic DNA concentrations. This mock microbiome community was designed to test HMP sequencing protocols and analysis.",
"environment-biome": "Artificial biome",
"environment-feature": "Artificial feature",
"environment-material": "Artificial material",
"sample-name": "HMP Microbial Mock Community (Staggered, Low Concentration), v3.2",
"sample-alias": "HM-279D Staggered, Low Concentration community",
"host-tax-id": null,
"species": null,
"last-update": "2015-08-13T15:30:54"
},
"relationships": {
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS121012/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00000300",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000300?format=api"
}
}
]
},
"biome": {
"data": {
"type": "biomes",
"id": "root:Engineered:Modeled:Simulated communities (DNA mixture)"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Engineered:Modeled:Simulated%20communities%20(DNA%20mixture)?format=api"
}
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS121012/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS121012?format=api"
}
}
}