GET /metagenomics/api/v1/samples/SRS009554?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "SRS009554",
        "attributes": {
            "biosample": "SAMN00007250",
            "longitude": -4.2089,
            "sample-metadata": [
                {
                    "key": "silicate",
                    "value": "6.01",
                    "unit": "µmol/L"
                },
                {
                    "key": "temperature",
                    "value": "10.1",
                    "unit": "°C"
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "-4.216",
                    "unit": null
                },
                {
                    "key": "geographic location (depth)",
                    "value": "0",
                    "unit": "m"
                },
                {
                    "key": "geographic location (altitude)",
                    "value": "0",
                    "unit": "m"
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "United Kingdom",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2008-01-28 T15:00",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "marine biome ENVO:00000447",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "marine habitat ENVO:00000569",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "sea water ENVO:00002149",
                    "unit": null
                },
                {
                    "key": "relationship to oxygen",
                    "value": "aerobic",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "Niskin Bottle",
                    "unit": null
                },
                {
                    "key": "sample material processing",
                    "value": "prefiltration through a 1.6 um 144 mm glass fibre filter, filtrate then passed through a 0.22 um Sterivex cartirdge",
                    "unit": null
                },
                {
                    "key": "amount or size of sample collected",
                    "value": "2",
                    "unit": "L"
                },
                {
                    "key": "ammonium",
                    "value": "0",
                    "unit": "µmol/L"
                },
                {
                    "key": "chlorophyll",
                    "value": "0.81",
                    "unit": "µg/L"
                },
                {
                    "key": "nitrate",
                    "value": "10.9",
                    "unit": "µmol/L"
                },
                {
                    "key": "organic carbon",
                    "value": "33.185",
                    "unit": "µmol/L"
                },
                {
                    "key": "organic nitrogen",
                    "value": "1.331",
                    "unit": "µmol/L"
                },
                {
                    "key": "oxygenation status of sample",
                    "value": "aerobic",
                    "unit": null
                },
                {
                    "key": "phosphate",
                    "value": "0.53",
                    "unit": "µmol/L"
                },
                {
                    "key": "salinity",
                    "value": "33.3",
                    "unit": "practical salinity units"
                },
                {
                    "key": "geographic location (elevation)",
                    "value": "0",
                    "unit": "m"
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "50.2",
                    "unit": null
                },
                {
                    "key": "total depth of water column",
                    "value": "49",
                    "unit": "m"
                },
                {
                    "key": "alt id - submitted sample id",
                    "value": "PML_0038_2008_01_28",
                    "unit": null
                },
                {
                    "key": "GOLD sample classification",
                    "value": "Environmental > Aquatic > Marine > Oceanic > Uncharacterized",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "408172",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX Titanium",
                    "unit": null
                }
            ],
            "latitude": 50.2518,
            "accession": "SRS009554",
            "analysis-completed": "2011-04-21",
            "collection-date": "2008-01-28",
            "geo-loc-name": "United Kingdom; Plymouth",
            "sample-desc": "Marine DNA/RNA sample from Western English Channel site L4",
            "environment-biome": "marine biome ",
            "environment-feature": "marine habitat",
            "environment-material": "sea water",
            "sample-name": "Western English Channel, Jan 28th 3.38pm with 1.6 µm prefilter",
            "sample-alias": "PML_0038_2008_01_28",
            "host-tax-id": null,
            "species": null,
            "last-update": "2015-08-13T15:30:56"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine:Oceanic"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS009554/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000257",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000257?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS009554/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/SRS009554?format=api"
        }
    }
}