Sample Instance

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{
    "data": {
        "type": "samples",
        "id": "ERS970968",
        "attributes": {
            "latitude": 52.37,
            "longitude": 9.73,
            "sample-metadata": [
                {
                    "key": "investigation type",
                    "value": "mimarks-survey",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Novel immunomodulatory flagellin-like protein FlaC in Campylobacter jejuni and other Campylobacterales",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2015-03-23",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "host-associated",
                    "unit": null
                },
                {
                    "key": "target gene",
                    "value": "16S rDNA",
                    "unit": null
                },
                {
                    "key": "target subfragment",
                    "value": "V1 - V3",
                    "unit": null
                },
                {
                    "key": "pcr primers",
                    "value": "8F (5'-AGAGTTTGATCCTGGCTCAG-3'), 541R (5'-WTTACCGCGGCTGCTGG-3'); sequencing primer: 541R",
                    "unit": null
                },
                {
                    "key": "multiplex identifiers",
                    "value": "CTCGCGTGTC",
                    "unit": null
                },
                {
                    "key": "adapters",
                    "value": "TCAG",
                    "unit": null
                },
                {
                    "key": "sequencing method",
                    "value": "pyrosequencing",
                    "unit": null
                },
                {
                    "key": "host common name",
                    "value": "white Leghorn layer chicken",
                    "unit": null
                },
                {
                    "key": "host taxid",
                    "value": "9031",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "506600",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "GSC MIxS host associated (ERC000013)",
                    "unit": null
                },
                {
                    "key": "host age",
                    "value": "4",
                    "unit": "weeks"
                },
                {
                    "key": "host body site",
                    "value": "caecum",
                    "unit": null
                },
                {
                    "key": "host infra-specific name",
                    "value": "white Leghorn layer chicken",
                    "unit": null
                }
            ],
            "biosample": "SAMEA3663819",
            "accession": "ERS970968",
            "analysis-completed": "2016-09-28",
            "collection-date": null,
            "geo-loc-name": "Germany",
            "sample-desc": "control group (cloacal administration of sterile cell culture-grade PBS at two weeks, 3 weeks and 3.5 weeks after hatching)",
            "environment-biome": "animal facility",
            "environment-feature": "animal facility",
            "environment-material": "air",
            "sample-name": "caecal mucosal microbiota of chicken 8",
            "sample-alias": "Chicken_8",
            "host-tax-id": 9031,
            "species": "Gallus gallus",
            "last-update": "2016-09-28T09:44:19"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Birds:Digestive system:Fecal"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Birds:Digestive%20system:Fecal?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS970968/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001234",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001234?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS970968/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS970968?format=api"
        }
    }
}