HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"data": {
"type": "samples",
"id": "ERS861199",
"attributes": {
"longitude": 29.0618,
"biosample": "SAMEA3554050",
"latitude": 62.7179,
"sample-metadata": [
{
"key": "investigation type",
"value": "mimarks-survey",
"unit": null
},
{
"key": "project name",
"value": "Outo_fract",
"unit": null
},
{
"key": "geographic location (depth)",
"value": "2300",
"unit": "m"
},
{
"key": "collection date",
"value": "2011-07-21",
"unit": null
},
{
"key": "source material identifiers",
"value": "Outokumpu fract 2300mDNA",
"unit": null
},
{
"key": "sample collection device or method",
"value": "slow cont pumping",
"unit": null
},
{
"key": "sample material processing",
"value": "filtration",
"unit": null
},
{
"key": "amount or size of sample collected",
"value": "1",
"unit": "L"
},
{
"key": "nucleic acid extraction",
"value": "commercial kit",
"unit": null
},
{
"key": "nucleic acid amplification",
"value": "PCR",
"unit": null
},
{
"key": "target gene",
"value": "16S rRNA",
"unit": null
},
{
"key": "target subfragment",
"value": "V4",
"unit": null
},
{
"key": "pcr primers",
"value": "A344,A744",
"unit": null
},
{
"key": "multiplex identifiers",
"value": "TACATA",
"unit": null
},
{
"key": "adapters",
"value": "ACGGGGCGCAGCAGGCGCGA",
"unit": null
},
{
"key": "sequencing method",
"value": "pyrosequencing",
"unit": null
},
{
"key": "alkalinity",
"value": "0.29",
"unit": "mEq/L"
},
{
"key": "calcium",
"value": "9480",
"unit": "mg/L"
},
{
"key": "chloride",
"value": "24500",
"unit": "mg/L"
},
{
"key": "dissolved inorganic carbon",
"value": "0",
"unit": "µg/L"
},
{
"key": "dissolved organic carbon",
"value": "34",
"unit": "µmol/L"
},
{
"key": "magnesium",
"value": "18.7",
"unit": "mg/L"
},
{
"key": "pH",
"value": "8.6",
"unit": null
},
{
"key": "NCBI sample classification",
"value": "115547",
"unit": null
},
{
"key": "instrument model",
"value": "454 GS FLX Titanium",
"unit": null
},
{
"key": "ENA checklist",
"value": "GSC MIxS water (ERC000024)",
"unit": null
},
{
"key": "geographic location (region and locality)",
"value": "Outokumpu",
"unit": null
},
{
"key": "conductivity",
"value": "4370",
"unit": "mS/cm"
},
{
"key": "sample volume or weight for DNA extraction",
"value": "1000",
"unit": "mL"
},
{
"key": "water environmental package",
"value": "water",
"unit": null
}
],
"accession": "ERS861199",
"analysis-completed": "2017-03-21",
"collection-date": null,
"geo-loc-name": "Finland",
"sample-desc": "groundwater",
"environment-biome": "deep subsurface",
"environment-feature": "crystalline bedrock",
"environment-material": "groundwater",
"sample-name": "Outokumpu fract 2300mDNA",
"sample-alias": "Outo2300maDNA_b",
"host-tax-id": null,
"species": null,
"last-update": "2017-03-21T11:42:59"
},
"relationships": {
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS861199/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001611",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001611?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS861199/runs?format=api"
}
},
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Terrestrial:Rock-dwelling (subaerial biofilm)"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Rock-dwelling%20(subaerial%20biofilm)?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS861199?format=api"
}
}
}