Sample Studies Relationship List

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            "type": "studies",
            "id": "MGYS00006277",
            "attributes": {
                "samples-count": 36,
                "accession": "MGYS00006277",
                "bioproject": "PRJEB48645",
                "is-private": false,
                "last-update": "2023-08-05T07:48:50",
                "secondary-accession": "ERP133037",
                "centre-name": "CHU",
                "public-release-date": null,
                "study-abstract": "The aim of this study is to assess the prognostic value of lung microbiota in critically ill influenza patients. Every PCR-proven influenza patient admitted to intensive care unit of two hospitals for respiratory failure during 2019-2020 pandemics were included (NCT04131296). Sputum or tracheal aspirates were sampled and DNA extraction was performed by QIAamp® PowerFecal® Pro DNA kit (QIAgen®). V3-V4 regions of 16SRNA coding gene was amplified to analyse the bacterial kingdom of lung microbiota (bacteriobiota) and ITS2 to analyse the fungal kingdom (mycobiota). Sequencing (2x250bp paired-end reads) was performed on MiSeq sequencer (Illumina®) and DADA2 pipeline on R software was used for bioinformatics analyses.",
                "study-name": "Lung microbiota but not mycobiota predicts day 28 mortality in critically ill influenza patients: a feasibility study",
                "data-origination": "SUBMITTED"
            },
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