GET /metagenomics/api/v1/samples/ERS819314?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS819314",
        "attributes": {
            "biosample": "SAMEA3512165",
            "longitude": 11.7578,
            "sample-metadata": [
                {
                    "key": "silicate",
                    "value": "2.17",
                    "unit": null
                },
                {
                    "key": "temperature",
                    "value": "28.32",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "39.897102 11.7578335",
                    "unit": null
                },
                {
                    "key": "geographic location (depth)",
                    "value": "1",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "Temperate Northern Atlantic:Mediterranean Sea:Western Mediterranean Marine Ecoregion:Tyrrhenian Sea, Seamount Magnaghi, Italy",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2010-07-13 12:20 PM +0000",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "ocean biome",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "Open Ocean",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "chlorophyll",
                    "value": "0.2",
                    "unit": null
                },
                {
                    "key": "dissolved oxygen",
                    "value": "4.41",
                    "unit": null
                },
                {
                    "key": "nitrate",
                    "value": "0.053",
                    "unit": null
                },
                {
                    "key": "nitrite",
                    "value": "<0.03 (below detection)",
                    "unit": null
                },
                {
                    "key": "pH",
                    "value": "7.99",
                    "unit": null
                },
                {
                    "key": "phosphate",
                    "value": "<0.03 (below detection)",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "38.01",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "408172",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX Titanium",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ENA default sample checklist (ERC000011)",
                    "unit": null
                }
            ],
            "latitude": 39.8971,
            "accession": "ERS819314",
            "analysis-completed": "2016-03-23",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "Water sample taken on 2010-07-13 12:20 PM +0000 from site GS742 (lat:39.897102, long:11.7578335), 0.1?m filter fraction. Samples were collected by filtering 400L of water pumped through a 20?m prefilter, then size-fractionating by serial filtration through 3?m, 0.8?m, and 0.1?m membrane filters, then finally, in some samples, through tangential flow filtration fitted with a 50kDa pore size filter to concentrate a viral fraction. This genetic information may be considered to be part of the genetic patrimony of Italy, the country from which the sample was obtained.  Users of this information agree to:  1) acknowledge Italy as the country of origin in any country where the genetic information is presented and 2) contact the CBD focal point identified on the CBD website:  http://www.cbd.int/countries/ if they intend to use the genetic information for commercial purposes.",
            "environment-biome": null,
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "GS742 0.1?m",
            "sample-alias": "jcvi_beyster_201508_GS742_0p1",
            "host-tax-id": null,
            "species": null,
            "last-update": "2016-03-24T10:10:24"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS819314/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000641",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000641?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS819314/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS819314?format=api"
        }
    }
}