GET /metagenomics/api/v1/samples/ERS819286?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS819286",
        "attributes": {
            "biosample": "SAMEA3512137",
            "longitude": -4.2169,
            "latitude": 50.2498,
            "sample-metadata": [
                {
                    "key": "silicate",
                    "value": "1.171",
                    "unit": null
                },
                {
                    "key": "temperature",
                    "value": "11",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "50.249832 -4.216942",
                    "unit": null
                },
                {
                    "key": "geographic location (depth)",
                    "value": "17",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "North Atlantic Ocean:Northern European Seas:Celtic Seas Marine Ecoregion:UK",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2009-05-21 11:00 AM +0000",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "ocean biome",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "Coastal",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "chlorophyll",
                    "value": "1.5",
                    "unit": null
                },
                {
                    "key": "dissolved oxygen",
                    "value": "6.1",
                    "unit": null
                },
                {
                    "key": "nitrate",
                    "value": "0.252",
                    "unit": null
                },
                {
                    "key": "nitrite",
                    "value": "<0.03 (below detection)",
                    "unit": null
                },
                {
                    "key": "pH",
                    "value": "8.4",
                    "unit": null
                },
                {
                    "key": "phosphate",
                    "value": "0.035",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "35",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "408172",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX Titanium",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ENA default sample checklist (ERC000011)",
                    "unit": null
                }
            ],
            "accession": "ERS819286",
            "analysis-completed": "2016-03-23",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "Water sample taken on 2009-05-21 11:00 AM +0000 from site GS642 (lat:50.249832, long:-4.216942), 3.0?m filter fraction. Samples were collected by filtering 200L of water pumped through a 20?m prefilter, then size-fractionating by serial filtration through 3?m, 0.8?m, and 0.1?m membrane filters, then finally, in some samples, through tangential flow filtration fitted with a 50kDa pore size filter to concentrate a viral fraction. This genetic information may be considered to be part of the genetic patrimony of England , the country from which the sample was obtained.  Users of this information agree to:  1) acknowledge England  as the country of origin in any country where the genetic information is presented and 2) contact the CBD focal point identified on the CBD website:  http://www.cbd.int/countries/ if they intend to use the genetic information for commercial purposes.",
            "environment-biome": null,
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "GS642 3.0?m",
            "sample-alias": "jcvi_beyster_201508_GS642_3p0",
            "host-tax-id": null,
            "species": null,
            "last-update": "2016-03-24T10:10:24"
        },
        "relationships": {
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS819286/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000641",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000641?format=api"
                        }
                    }
                ]
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
                }
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS819286/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS819286?format=api"
        }
    }
}