HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"data": {
"type": "samples",
"id": "ERS697789",
"attributes": {
"longitude": 21.4833,
"biosample": "SAMEA3322887",
"latitude": 61.2333,
"sample-metadata": [
{
"key": "investigation type",
"value": "mimarks-survey",
"unit": null
},
{
"key": "project name",
"value": "DeepRunko",
"unit": null
},
{
"key": "geographic location (depth)",
"value": "415",
"unit": "m"
},
{
"key": "collection date",
"value": "2009-12-14",
"unit": null
},
{
"key": "source material identifiers",
"value": "OL-KR49/415m",
"unit": null
},
{
"key": "relationship to oxygen",
"value": "anaerobe",
"unit": null
},
{
"key": "sample collection device or method",
"value": "pump",
"unit": null
},
{
"key": "sample material processing",
"value": "filtration",
"unit": null
},
{
"key": "amount or size of sample collected",
"value": "1",
"unit": "L"
},
{
"key": "nucleic acid extraction",
"value": "commercial kit",
"unit": null
},
{
"key": "nucleic acid amplification",
"value": "PCR",
"unit": null
},
{
"key": "target gene",
"value": "dsrB",
"unit": null
},
{
"key": "target subfragment",
"value": "dsrB",
"unit": null
},
{
"key": "pcr primers",
"value": "dsr2060f, dsr4r",
"unit": null
},
{
"key": "multiplex identifiers",
"value": "TGAGCA",
"unit": null
},
{
"key": "adapters",
"value": "CGTATCGCCTCCCTCGCGCCATCAG",
"unit": null
},
{
"key": "sequencing method",
"value": "pyrosequencing",
"unit": null
},
{
"key": "alkalinity",
"value": "0.16",
"unit": "mEq/L"
},
{
"key": "calcium",
"value": "2700",
"unit": "mg/L"
},
{
"key": "chloride",
"value": "9940",
"unit": "mg/L"
},
{
"key": "dissolved inorganic carbon",
"value": "0",
"unit": "µg/L"
},
{
"key": "dissolved organic carbon",
"value": "0",
"unit": "µmol/L"
},
{
"key": "magnesium",
"value": "19",
"unit": "mol/L"
},
{
"key": "nitrate",
"value": "0",
"unit": "µmol/L"
},
{
"key": "oxygenation status of sample",
"value": "anaerobic",
"unit": null
},
{
"key": "pH",
"value": "8.1",
"unit": null
},
{
"key": "NCBI sample classification",
"value": "77133",
"unit": null
},
{
"key": "instrument model",
"value": "454 GS FLX Titanium",
"unit": null
},
{
"key": "ENA checklist",
"value": "GSC MIxS water (ERC000024)",
"unit": null
},
{
"key": "geographic location (region and locality)",
"value": "Olkiluoto",
"unit": null
},
{
"key": "conductivity",
"value": "26700",
"unit": "mS/cm"
},
{
"key": "sample volume or weight for DNA extraction",
"value": "1000",
"unit": "mL"
},
{
"key": "water environmental package",
"value": "water",
"unit": null
}
],
"accession": "ERS697789",
"analysis-completed": "2017-03-17",
"collection-date": null,
"geo-loc-name": "Finland",
"sample-desc": "sulphate reducers in groundwater",
"environment-biome": "deep subsurface",
"environment-feature": "crystalline bedrock",
"environment-material": "groundwater",
"sample-name": "OL-KR49/415m",
"sample-alias": "D415KR49D09PW",
"host-tax-id": null,
"species": null,
"last-update": "2017-03-17T10:01:33"
},
"relationships": {
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Terrestrial:Geologic"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Geologic?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS697789/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001596",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001596?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS697789/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS697789?format=api"
}
}
}