GET /metagenomics/api/v1/samples/ERS689314?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS689314",
        "attributes": {
            "longitude": null,
            "biosample": "SAMEA3313252",
            "latitude": null,
            "sample-metadata": [
                {
                    "key": "silicate",
                    "value": "0.57",
                    "unit": "umol/L"
                },
                {
                    "key": "temperature",
                    "value": "25.6",
                    "unit": "°C"
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "18.116 -103.1153333",
                    "unit": "Degrees"
                },
                {
                    "key": "geographic location (depth)",
                    "value": "1.2",
                    "unit": "m"
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "North Pacific Ocean:Mexican Tropical Pacific Marine Ecoregion:Coastal Michoacan State, Mexico",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2007-02-19T23:30:00+00:00",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "ocean biome",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "coastal ocean",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "chlorophyll",
                    "value": "0.47",
                    "unit": "mg/m3"
                },
                {
                    "key": "dissolved oxygen",
                    "value": "3.8",
                    "unit": "mg/L"
                },
                {
                    "key": "nitrate",
                    "value": "0.077",
                    "unit": "umol/L"
                },
                {
                    "key": "phosphate",
                    "value": "0",
                    "unit": "umol/L"
                },
                {
                    "key": "salinity",
                    "value": "38.4",
                    "unit": "ppt"
                },
                {
                    "key": "NCBI sample classification",
                    "value": "408172",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "AB 3730xL Genetic Analyzer",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ENA default sample checklist (ERC000011)",
                    "unit": null
                }
            ],
            "accession": "ERS689314",
            "analysis-completed": "2016-05-18",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "Water sample taken on 2007-02-19T23:30:00+00:00 from site GS244 (lat:18.116, long:-103.1153333), 0.1µm filter fraction. Samples were collected by filtering water pumped through a 20µm prefilter, then size-fractionating by serial filtration through 3µm, 0.8µm, and 0.1µm membrane filters, then finally, in some samples, through tangential flow filtration fitted with a 50kDa pore size filter to concentrate a viral fraction. This genetic information may be considered to be part of the genetic patrimony of Mexico, the country from which the sample was obtained.  Users of this information agree to:  1) acknowledge Mexico as the country of origin in any country where the genetic information is presented and 2) contact the CBD focal point identified on the CBD website:  http://www.cbd.int/countries/ if they intend to use the genetic information for commercial purposes.",
            "environment-biome": null,
            "environment-feature": null,
            "environment-material": null,
            "sample-name": "GS244 0.1µm",
            "sample-alias": "jcvi_cn_GS244_0.1",
            "host-tax-id": null,
            "species": null,
            "last-update": "2016-05-20T10:28:29"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine:Oceanic:Photic zone"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic:Photic%20zone?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS689314/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000974",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000974?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS689314/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS689314?format=api"
        }
    }
}