Sample Instance

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{
    "data": {
        "type": "samples",
        "id": "ERS645040",
        "attributes": {
            "latitude": 38.6371,
            "longitude": -90.2571,
            "sample-metadata": [
                {
                    "key": "investigation type",
                    "value": "mimarks-survey",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2014-07-01",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "miscellaneous natural or artificial environment",
                    "unit": null
                },
                {
                    "key": "sequencing method",
                    "value": "illumina",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "10090",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina MiSeq",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "GSC MIxS miscellaneous natural or artificial environment (ERC000025)",
                    "unit": null
                }
            ],
            "biosample": "SAMEA3218088",
            "accession": "ERS645040",
            "analysis-completed": "2016-06-15",
            "collection-date": null,
            "geo-loc-name": "USA",
            "sample-desc": "V4-16S sequencing. Colonization of mice with a defined consortia of microbes. This fecal sample was obtained from mouse #3, 1 days afterV4-16S sequencing. Colonization with Enterobacteriaceae, Bacteroidetes and Enterococci. The mouse was fed the Malawi diet. Please see our paper for additional details.",
            "environment-biome": "ENVO:01000219",
            "environment-feature": "ENVO:01000159",
            "environment-material": "ENVO:00002003",
            "sample-name": "L.57KMP2.CombCul.Mal.B3.d1.FP",
            "sample-alias": "L.57KMP2.CombCul.Mal.B3.d1.FP",
            "host-tax-id": 9609,
            "species": "Homo sapiens",
            "last-update": "2016-06-15T15:15:54"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Human:Digestive system"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Human:Digestive%20system?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS645040/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001075",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001075?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS645040/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS645040?format=api"
        }
    }
}