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{
"data": {
"type": "samples",
"id": "ERS514174",
"attributes": {
"sample-metadata": [
{
"key": "investigation type",
"value": "metagenome",
"unit": null
},
{
"key": "project name",
"value": "DeepOlki",
"unit": null
},
{
"key": "geographic location (depth)",
"value": "798",
"unit": "m"
},
{
"key": "collection date",
"value": "2010-05-18",
"unit": null
},
{
"key": "source material identifiers",
"value": "groundwater",
"unit": null
},
{
"key": "sample collection device or method",
"value": "pumping",
"unit": null
},
{
"key": "sample material processing",
"value": "concentration by filtration",
"unit": null
},
{
"key": "nucleic acid extraction",
"value": "MoBio Power water RNA extraction kit",
"unit": null
},
{
"key": "pcr primers",
"value": "ACGGGGCGCAGCAGGCGCGA, CCCGGGTATCTAATCC",
"unit": null
},
{
"key": "multiplex identifiers",
"value": "TACTCG",
"unit": null
},
{
"key": "adapters",
"value": "CGTATCGCCTCCCTCGCGCCATCAG, CTATGCGCCTTGCCAGCCCGCTCAG",
"unit": null
},
{
"key": "sequencing method",
"value": "454 Titanium",
"unit": null
},
{
"key": "alkalinity",
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"unit": "mEq/L"
},
{
"key": "calcium",
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"unit": "mg/L"
},
{
"key": "chloride",
"value": "33500",
"unit": "mg/L"
},
{
"key": "magnesium",
"value": "0.006",
"unit": "mol/L"
},
{
"key": "organism count",
"value": "23000",
"unit": null
},
{
"key": "oxygenation status of sample",
"value": "anaerobic",
"unit": null
},
{
"key": "pH",
"value": "7.3",
"unit": null
},
{
"key": "NCBI sample classification",
"value": "115547",
"unit": null
},
{
"key": "instrument model",
"value": "454 GS FLX Titanium",
"unit": null
},
{
"key": "ENA checklist",
"value": "GSC MIxS water (ERC000024)",
"unit": null
},
{
"key": "geographic location (region and locality)",
"value": "Olkiluoto",
"unit": null
},
{
"key": "conductivity",
"value": "7820",
"unit": "mS/cm"
},
{
"key": "sample volume or weight for DNA extraction",
"value": "1000",
"unit": "mL"
},
{
"key": "water environmental package",
"value": "water",
"unit": null
}
],
"longitude": 21.4408,
"biosample": "SAMEA2673239",
"latitude": 61.2369,
"accession": "ERS514174",
"analysis-completed": "2017-03-14",
"collection-date": null,
"geo-loc-name": "Finland",
"sample-desc": "Deep groundwater archaea",
"environment-biome": "aquifer",
"environment-feature": "saline groundwater",
"environment-material": "water",
"sample-name": "OL-KR29A",
"sample-alias": "OL-KR29A",
"host-tax-id": null,
"species": null,
"last-update": "2017-03-14T13:53:10"
},
"relationships": {
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS514174/runs?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS514174/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001572",
"links": {
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}
}
]
},
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Aquatic:Freshwater:Groundwater"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Freshwater:Groundwater?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS514174?format=api"
}
}
}