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{
"data": {
"type": "samples",
"id": "ERS506046",
"attributes": {
"biosample": "SAMEA2661639",
"sample-metadata": [
{
"key": "temperature",
"value": "17.256933",
"unit": null
},
{
"key": "project name",
"value": "Tara Oceans expedition (2009-2013)",
"unit": null
},
{
"key": "geographic location (longitude)",
"value": "17.4105",
"unit": null
},
{
"key": "collection date",
"value": "2009-11-16",
"unit": null
},
{
"key": "environment (biome)",
"value": "marine biome (ENVO:00000447)",
"unit": null
},
{
"key": "environment (feature)",
"value": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
"unit": null
},
{
"key": "environment (material)",
"value": "particulate matter, including plankton (ENVO:xxxxxxxx)",
"unit": null
},
{
"key": "environmental package",
"value": "water",
"unit": null
},
{
"key": "sample collection device or method",
"value": "PLANKTON NET, TYPE=Bongo, MESH_Size_(µm)=180, MOUTH_Opening_(m^2)=0.258319, LENGTH_(m)=3",
"unit": null
},
{
"key": "depth",
"value": "200",
"unit": null
},
{
"key": "salinity",
"value": "38.116165",
"unit": null
},
{
"key": "geographic location (latitude)",
"value": "39.8607",
"unit": null
},
{
"key": "instrument model",
"value": "Illumina HiSeq 2000",
"unit": null
},
{
"key": "ENA checklist",
"value": "ERC000030",
"unit": null
}
],
"latitude": 39.8607,
"longitude": 17.4105,
"accession": "ERS506046",
"analysis-completed": "2018-05-14",
"collection-date": "2009-11-16",
"geo-loc-name": null,
"sample-desc": "This sample (TARA_A100000700) was collected during the Tara Oceans Expedition (2009-2013) at station TARA_022 (latitudeN=39.8607, longitudeE=17.4105) on date/time=2009-11-16T09:37, using a PLANKTON NET, TYPE=Bongo, MESH_Size_(µm)=180, MOUTH_Opening_(m^2)=0.258319, LENGTH_(m)=3. The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 198-202 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (180-2000 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has no replicate.",
"environment-biome": "marine biome (ENVO:00000447)",
"environment-feature": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
"environment-material": "particulate matter, including plankton (ENVO:xxxxxxxx)",
"sample-name": "TARA_A100000700",
"sample-alias": "TARA_A100000700",
"host-tax-id": null,
"species": null,
"last-update": "2024-04-15T20:14:10"
},
"relationships": {
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Aquatic:Marine:Oceanic"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS506046/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001306",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001306?format=api"
}
},
{
"type": "studies",
"id": "MGYS00002368",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002368?format=api"
}
},
{
"type": "studies",
"id": "MGYS00002392",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=api"
}
},
{
"type": "studies",
"id": "MGYS00006491",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006491?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS506046/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS506046?format=api"
}
}
}