GET /metagenomics/api/v1/samples/ERS492376?format=api
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Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS492376",
        "attributes": {
            "longitude": -100.6751,
            "biosample": "SAMEA2622497",
            "latitude": -16.9587,
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "19.881449",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Tara Oceans expedition (2009-2013)",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "-100.6751",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2011-05-31",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "marine biome (ENVO:00000447)",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": ""saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)"",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "90.0",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "35.68725",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "-16.9587",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina HiSeq 2000",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000030",
                    "unit": null
                }
            ],
            "accession": "ERS492376",
            "analysis-completed": "2017-08-23",
            "collection-date": "2011-05-31",
            "geo-loc-name": null,
            "sample-desc": ""This sample (TARA_R100000655) was collected during the Tara Oceans expedition (2009-2013) at station TARA_111 (latitudeN=-16.9587, longitudeE=-100.6751) on date/time=2011-05-31T20:28:10, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles.  The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was collected at a depth of 86-95 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (<-0.22 micrometres), and stored in liquid nitrogen for later detection of virus nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis."",
            "environment-biome": "marine biome (ENVO:00000447)",
            "environment-feature": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
            "environment-material": ""saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)"",
            "sample-name": "TARA_R100000655",
            "sample-alias": "TARA_R100000655",
            "host-tax-id": null,
            "species": null,
            "last-update": "2021-10-01T15:33:36"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492376/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001918",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001918?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00005787",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005787?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492376/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492376?format=api"
        }
    }
}