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{
"data": {
"type": "samples",
"id": "ERS492309",
"attributes": {
"longitude": -84.6141,
"biosample": "SAMEA2622444",
"latitude": -1.8902,
"sample-metadata": [
{
"key": "temperature",
"value": "10.2584",
"unit": null
},
{
"key": "project name",
"value": "Tara Oceans expedition (2009-2013)",
"unit": null
},
{
"key": "geographic location (longitude)",
"value": "-84.6141",
"unit": null
},
{
"key": "collection date",
"value": "2011-05-22",
"unit": null
},
{
"key": "environment (biome)",
"value": "marine biome (ENVO:00000447)",
"unit": null
},
{
"key": "environment (feature)",
"value": "mesopelagic zone (ENVO:00000213)",
"unit": null
},
{
"key": "environment (material)",
"value": "\"particulate matter, including plankton (ENVO:xxxxxxxx)\"",
"unit": null
},
{
"key": "environmental package",
"value": "water",
"unit": null
},
{
"key": "sample collection device or method",
"value": "ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles",
"unit": null
},
{
"key": "depth",
"value": "380.0",
"unit": null
},
{
"key": "salinity",
"value": "34.755344",
"unit": null
},
{
"key": "geographic location (latitude)",
"value": "-1.8902",
"unit": null
},
{
"key": "instrument model",
"value": "Illumina Genome Analyzer IIx",
"unit": null
},
{
"key": "ENA checklist",
"value": "ERC000030",
"unit": null
}
],
"accession": "ERS492309",
"analysis-completed": "2018-06-07",
"collection-date": "2011-05-22",
"geo-loc-name": null,
"sample-desc": "\"This sample (TARA_N000001803) was collected during the Tara Oceans expedition (2009-2013) at station TARA_110 (latitudeN=-1.8902, longitudeE=-84.6141) on date/time=2011-05-22T13:20, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles. The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 376-385 m, targeting a mesopelagic zone (ENVO:00000213) in the marine biome (ENVO:00000447). The sample was size-fractionated (3-> micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis.\"",
"environment-biome": "marine biome (ENVO:00000447)",
"environment-feature": "mesopelagic zone (ENVO:00000213)",
"environment-material": "\"particulate matter, including plankton (ENVO:xxxxxxxx)\"",
"sample-name": "TARA_N000001803",
"sample-alias": "TARA_N000001803",
"host-tax-id": null,
"species": null,
"last-update": "2024-04-15T18:19:49"
},
"relationships": {
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492309/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001306",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001306?format=api"
}
},
{
"type": "studies",
"id": "MGYS00002392",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492309/runs?format=api"
}
},
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Aquatic:Marine:Oceanic"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492309?format=api"
}
}
}