GET /metagenomics/api/v1/samples/ERS492241?format=api
HTTP 200 OK
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Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS492241",
        "attributes": {
            "longitude": -84.589,
            "biosample": "SAMEA2622389",
            "latitude": -2.0133,
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "23.8683",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Tara Oceans expedition (2009-2013)",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "-84.589",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2011-05-21",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "marine biome (ENVO:00000447)",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "surface water layer (ENVO:00002042)",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "\"particulate matter, including plankton (ENVO:xxxxxxxx)\"",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "PUMP (High Volume Peristaltic Pump)",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "5",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "35.0193",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "-2.0133",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina HiSeq 2000",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000030",
                    "unit": null
                }
            ],
            "accession": "ERS492241",
            "analysis-completed": "2018-05-14",
            "collection-date": "2011-05-21",
            "geo-loc-name": null,
            "sample-desc": "\"This sample (TARA_N000001746) was collected during the Tara Oceans expedition (2009-2013) at station TARA_110 (latitudeN=-2.0133, longitudeE=-84.589) on date/time=2011-05-21T12:27, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (0.8-> micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis. This sample has replicate sample(s): TARA_N000001747.\"",
            "environment-biome": "marine biome (ENVO:00000447)",
            "environment-feature": "surface water layer (ENVO:00002042)",
            "environment-material": "\"particulate matter, including plankton (ENVO:xxxxxxxx)\"",
            "sample-name": "TARA_N000001746",
            "sample-alias": "TARA_N000001746",
            "host-tax-id": null,
            "species": null,
            "last-update": "2025-07-03T17:51:00"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492241/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001306",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001306?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00002368",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002368?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00002392",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00006491",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006491?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492241/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS492241?format=api"
        }
    }
}