Sample Instance

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{
    "data": {
        "type": "samples",
        "id": "ERS491483",
        "attributes": {
            "latitude": -33.9116,
            "longitude": -73.0537,
            "biosample": "SAMEA2621832",
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "16.40115",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "-73.0537",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2011-03-12",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "marine biome (ENVO:00000447)",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": ""particulate matter, including plankton (ENVO:xxxxxxxx)"",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "35.0",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "34.267975",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "-33.9116",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina HiSeq 2000",
                    "unit": null
                }
            ],
            "accession": "ERS491483",
            "analysis-completed": "2018-05-14",
            "collection-date": "2011-03-12",
            "geo-loc-name": null,
            "sample-desc": "\"This sample (TARA_N000001098) was collected during the Tara Oceans expedition (2009-2013) at station TARA_093 (latitudeN=-33.9116, longitudeE=-73.0537) on date/time=2011-03-12T19:36:38, using a ROSETTE sampler with CTD (sbe9C) and 10 Niskin bottles.  The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 35-35 m, targeting a deep chlorophyll maximum layer (ENVO:xxxxxxxx) in the marine biome (ENVO:00000447). The sample was size-fractionated (5-20 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics/transcriptomics analysis. This sample has replicate sample(s): TARA_N000001099.\"",
            "environment-biome": "marine biome (ENVO:00000447)",
            "environment-feature": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
            "environment-material": ""particulate matter, including plankton (ENVO:xxxxxxxx)"",
            "sample-name": "TARA_20110312T1937Z_093_Combined-EVENTS_CAST_MB_D_(35 m)_PROT_NUC-RNA(1L)_W5-20_TARA_N000001098",
            "sample-alias": "TARA_N000001098",
            "host-tax-id": null,
            "species": null,
            "last-update": "2018-05-14T09:35:09"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
                }
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS491483/runs?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS491483/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00002368",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002368?format=api"
                        }
                    }
                ]
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS491483?format=api"
        }
    }
}