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{
"data": {
"type": "samples",
"id": "ERS488884",
"attributes": {
"latitude": 18.5918,
"longitude": 66.622,
"sample-metadata": [
{
"key": "temperature",
"value": "26.81765",
"unit": null
},
{
"key": "project name",
"value": "Tara Oceans expedition (2009-2013)",
"unit": null
},
{
"key": "geographic location (longitude)",
"value": "66.622",
"unit": null
},
{
"key": "collection date",
"value": "2010-03-18",
"unit": null
},
{
"key": "environment (biome)",
"value": "marine biome (ENVO:00000447)",
"unit": null
},
{
"key": "environment (feature)",
"value": "surface water layer (ENVO:00002042)",
"unit": null
},
{
"key": "environment (material)",
"value": "\"particulate matter, including plankton (ENVO:xxxxxxxx)\"",
"unit": null
},
{
"key": "environmental package",
"value": "water",
"unit": null
},
{
"key": "sample collection device or method",
"value": "PUMP (High Volume Peristaltic Pump)",
"unit": null
},
{
"key": "depth",
"value": "5.0",
"unit": null
},
{
"key": "salinity",
"value": "36.285366",
"unit": null
},
{
"key": "geographic location (latitude)",
"value": "18.5918",
"unit": null
},
{
"key": "instrument model",
"value": "Illumina Genome Analyzer IIx",
"unit": null
},
{
"key": "ENA checklist",
"value": "ERC000030",
"unit": null
}
],
"biosample": "SAMEA2620070",
"accession": "ERS488884",
"analysis-completed": "2017-06-07",
"collection-date": "2010-03-18",
"geo-loc-name": null,
"sample-desc": "\"This sample (TARA_N000000016) was collected during the Tara Oceans expedition (2009-2013) at station TARA_039 (latitudeN=18.5918, longitudeE=66.622) on date/time=2010-03-18T04:27, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was collected at a depth of 3-7 m, targeting a surface water layer (ENVO:00002042) in the marine biome (ENVO:00000447). The sample was size-fractionated (5-20 micrometres), and stored in liquid nitrogen for later detection of unicellular eukaryote (protist) nucleic acid sequences by pyrosequencing methods, and for later metagenomics analysis.\"",
"environment-biome": "marine biome (ENVO:00000447)",
"environment-feature": "surface water layer (ENVO:00002042)",
"environment-material": "\"particulate matter, including plankton (ENVO:xxxxxxxx)\"",
"sample-name": "TARA_N000000016",
"sample-alias": "TARA_N000000016",
"host-tax-id": null,
"species": null,
"last-update": "2024-06-28T16:09:37"
},
"relationships": {
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Aquatic:Marine"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS488884/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001789",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001789?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS488884/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS488884?format=api"
}
}
}