Sample Instance

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{
    "data": {
        "type": "samples",
        "id": "ERS480593",
        "attributes": {
            "sample-metadata": [
                {
                    "key": "investigation type",
                    "value": "mimarks-specimen",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "TIM2_iron_study",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "5.2332315",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "Netherlands",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2011-08-29",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "terrestrial biome",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "anaerobic bioreactor",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "feces",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "miscellaneous natural or artificial environment",
                    "unit": null
                },
                {
                    "key": "sequencing method",
                    "value": "Illumina",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "52.090588",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "256318",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina HiSeq 2500",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000025",
                    "unit": null
                }
            ],
            "longitude": 5.2332,
            "biosample": "SAMEA2602897",
            "latitude": 52.0906,
            "accession": "ERS480593",
            "analysis-completed": "2015-06-12",
            "collection-date": "2011-08-29",
            "geo-loc-name": "Netherlands",
            "sample-desc": "Gut microbial metabolism shifts towards a more toxic profile with supplementary iron in a kinetic model of the human large intestine",
            "environment-biome": "terrestrial biome",
            "environment-feature": "anaerobic bioreactor",
            "environment-material": "feces",
            "sample-name": "TIM2_iron_study3",
            "sample-alias": "TIM2_iron_study3",
            "host-tax-id": 9606,
            "species": "Homo sapiens",
            "last-update": "2022-02-25T16:55:53"
        },
        "relationships": {
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS480593/runs?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS480593/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000489",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000489?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00002024",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002024?format=api"
                        }
                    }
                ]
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Human:Digestive system:Large intestine:Sigmoid colon"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Human:Digestive%20system:Large%20intestine:Sigmoid%20colon?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS480593?format=api"
        }
    }
}