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{
"data": {
"type": "samples",
"id": "ERS477979",
"attributes": {
"biosample": "SAMEA2591084",
"longitude": 17.715,
"sample-metadata": [
{
"key": "temperature",
"value": "17.32198",
"unit": null
},
{
"key": "project name",
"value": "Tara Oceans",
"unit": null
},
{
"key": "geographic location (longitude)",
"value": "17.715",
"unit": null
},
{
"key": "geographic location (depth)",
"value": "5",
"unit": "m"
},
{
"key": "environment (biome)",
"value": "marine biome (ENVO:00000447)",
"unit": null
},
{
"key": "environment (feature)",
"value": "surface water (ENVO:00002042) layer",
"unit": null
},
{
"key": "environment (material)",
"value": "saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)",
"unit": null
},
{
"key": "environmental package",
"value": "water",
"unit": null
},
{
"key": "depth",
"value": "5.0",
"unit": null
},
{
"key": "salinity",
"value": "38.201397",
"unit": null
},
{
"key": "geographic location (latitude)",
"value": "42.2038",
"unit": null
},
{
"key": "NCBI sample classification",
"value": "408172",
"unit": null
},
{
"key": "instrument model",
"value": "454 GS FLX Titanium",
"unit": null
},
{
"key": "ENA checklist",
"value": "ERC000030",
"unit": null
},
{
"key": "latitude end",
"value": "42.1874",
"unit": "DD"
},
{
"key": "longitude end",
"value": "17.7189",
"unit": "DD"
},
{
"key": "marine region",
"value": "(search radius=5 degree) Marine Ecoregion:Adriatic Sea (MRGID:3314), Marine Ecoregion:Ionian Sea (MRGID:3351)",
"unit": null
},
{
"key": "protocol label",
"value": "BACT_NUC-DNA(100L)_W0.22-1.6",
"unit": null
},
{
"key": "sampling campaign",
"value": "TARA_20091111Z",
"unit": null
},
{
"key": "sampling platform",
"value": "SV Tara",
"unit": null
},
{
"key": "chlorophyll sensor",
"value": "0.0419",
"unit": "mg Chl/m3"
},
{
"key": "citation",
"value": "tbd",
"unit": null
},
{
"key": "event date/time end",
"value": "2009-11-18T10:46Z",
"unit": null
},
{
"key": "event date/time start",
"value": "2009-11-18T08:41Z",
"unit": null
},
{
"key": "event label",
"value": "TARA_20091118T0841Z_023_EVENT_PUMP",
"unit": null
},
{
"key": "further details",
"value": "tbd",
"unit": null
},
{
"key": "last update date",
"value": "2014-03-01Z",
"unit": null
},
{
"key": "nitrate sensor",
"value": "99999",
"unit": "µmol/L"
},
{
"key": "oxygen sensor",
"value": "221.457208",
"unit": "µmol/Kg"
},
{
"key": "salinity sensor",
"value": "38.201396",
"unit": "psu"
},
{
"key": "sample collection device",
"value": "PUMP (High Volume Peristaltic Pump)",
"unit": null
},
{
"key": "sample status",
"value": "This version is NOT FINAL but can be used to provide data discovery services",
"unit": null
},
{
"key": "sampling station",
"value": "TARA_023",
"unit": null
},
{
"key": "size fraction lower threshold",
"value": "0.22",
"unit": null
},
{
"key": "size fraction upper threshold",
"value": "1.6",
"unit": null
}
],
"latitude": 42.2038,
"accession": "ERS477979",
"analysis-completed": "2015-03-17",
"collection-date": "2009-11-18",
"geo-loc-name": null,
"sample-desc": "This sample (TARA_E500000075) was collected in the marine biome (ENVO:00000447) during Tara Oceans expedition on date/time=2009-11-18T08:41Z at station TARA_023 (latitudeN=42.2038, longitudeE=17.715) from a surface water (ENVO:00002042) layer at a depth of 3-7 m, using a PUMP (High Volume Peristaltic Pump). The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was size-fractionated (0.22-1.6 micrometres) and preserved on board in liquid nitrogen for later phylogenetic analysis of prokaryote nucleotide sequences identification by pyrosequencing methods.",
"environment-biome": "marine biome (ENVO:00000447)",
"environment-feature": "surface water (ENVO:00002042) layer",
"environment-material": "saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)",
"sample-name": "TARA_E500000075",
"sample-alias": "TARA_E500000075",
"host-tax-id": null,
"species": null,
"last-update": "2024-04-15T16:21:48"
},
"relationships": {
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Aquatic:Marine:Oceanic"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477979/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00000410",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000410?format=api"
}
},
{
"type": "studies",
"id": "MGYS00000492",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000492?format=api"
}
},
{
"type": "studies",
"id": "MGYS00002008",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002008?format=api"
}
},
{
"type": "studies",
"id": "MGYS00002392",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=api"
}
},
{
"type": "studies",
"id": "MGYS00006605",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006605?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477979/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477979?format=api"
}
}
}