Sample Instance

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS477953",
        "attributes": {
            "longitude": 1.9478,
            "biosample": "SAMEA2591074",
            "latitude": 37.0541,
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "17.36746",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Tara Oceans",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "1.9478",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "marine biome (ENVO:00000447)",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "42.0",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "99999.0",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "37.0541",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000030",
                    "unit": null
                }
            ],
            "accession": "ERS477953",
            "analysis-completed": null,
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "This sample (TARA_A200000159) was collected in the marine biome (ENVO:00000447) during Tara Oceans expedition on date/time=2009-09-23T16:08Z at station TARA_007 (latitudeN=37.0541, longitudeE=1.9478) from a deep chlorophyll maximum layer (ENVO:xxxxxxxx) at a depth of 40-44 m, using a PUMP (High Volume Peristaltic Pump). The sample material (saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)) was size-fractionated (0.22-1.6 micrometres) and preserved on board in liquid nitrogen for later phylogenetic analysis of large DNA virus nucleotide sequences identification by pyrosequencing methods.",
            "environment-biome": "marine biome (ENVO:00000447)",
            "environment-feature": "deep chlorophyll maximum layer (ENVO:xxxxxxxx)",
            "environment-material": "saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)",
            "sample-name": "TARA_A200000159",
            "sample-alias": "TARA_A200000159",
            "host-tax-id": null,
            "species": null,
            "last-update": "2024-04-15T17:45:13"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine:Oceanic"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477953/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00002392",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00006074",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006074?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477953/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477953?format=api"
        }
    }
}