GET /metagenomics/api/v1/samples/ERS477934?format=api
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Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS477934",
        "attributes": {
            "biosample": "SAMEA2591060",
            "longitude": 1.9378,
            "latitude": 37.051,
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "23.82575",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Tara Oceans",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "1.9378",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "marine biome (ENVO:00000447)",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "surface water (ENVO:00002042) layer",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "particulate matter, including plankton (ENVO:xxxxxxxx)",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "PUMP (High Volume Peristaltic Pump)",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "5.0",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "37.4911",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "37.051",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina Genome Analyzer IIx",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000030",
                    "unit": null
                }
            ],
            "accession": "ERS477934",
            "analysis-completed": "2017-06-07",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "This sample (TARA_A200000123) was collected in the marine biome (ENVO:00000447) during Tara Oceans expedition on date/time=2009-09-23T12:50Z at station TARA_007 (latitudeN=37.051, longitudeE=1.9378) from a surface water (ENVO:00002042) layer at a depth of 3-7 m, using a PUMP (High Volume Peristaltic Pump). The sample material (particulate matter, including plankton (ENVO:xxxxxxxx)) was size-fractionated (0.8-5 micrometres) and preserved on board in liquid nitrogen for later phylogenetic analysis of protist (unicellular eukaryote) nucleotide sequences identification by pyrosequencing methods. This sample has replicate sample(s): TARA_A200000124.",
            "environment-biome": "marine biome (ENVO:00000447)",
            "environment-feature": "surface water (ENVO:00002042) layer",
            "environment-material": "particulate matter, including plankton (ENVO:xxxxxxxx)",
            "sample-name": "TARA_A200000123",
            "sample-alias": "TARA_A200000123",
            "host-tax-id": null,
            "species": null,
            "last-update": "2024-06-28T16:08:10"
        },
        "relationships": {
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477934/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001306",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001306?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00001789",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001789?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00002368",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002368?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00002392",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002392?format=api"
                        }
                    }
                ]
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
                }
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477934/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS477934?format=api"
        }
    }
}