Sample Instance

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Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS462871",
        "attributes": {
            "biosample": "SAMEA2548014",
            "longitude": 151.1894,
            "sample-metadata": [
                {
                    "key": "sample storage temperature",
                    "value": "-80",
                    "unit": "°C"
                },
                {
                    "key": "tidal stage",
                    "value": "OTHER",
                    "unit": null
                },
                {
                    "key": "geographic location (depth)",
                    "value": "0.29",
                    "unit": "m"
                },
                {
                    "key": "geographic location (altitude)",
                    "value": "0",
                    "unit": "m"
                },
                {
                    "key": "environment (material)",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "filtration in 0.2 µm Durapore filters",
                    "unit": null
                },
                {
                    "key": "amount or size of sample collected",
                    "value": "5",
                    "unit": "L"
                },
                {
                    "key": "depth",
                    "value": "0.29",
                    "unit": "m"
                },
                {
                    "key": "mean friction velocity",
                    "value": "0",
                    "unit": "m/s"
                },
                {
                    "key": "mean peak friction velocity",
                    "value": "0",
                    "unit": "m/s"
                },
                {
                    "key": "oxygenation status of sample",
                    "value": "aerobic",
                    "unit": null
                },
                {
                    "key": "pressure",
                    "value": "1",
                    "unit": "atm"
                },
                {
                    "key": "sample storage duration",
                    "value": "7",
                    "unit": "months"
                },
                {
                    "key": "sample storage location",
                    "value": "freezer",
                    "unit": null
                },
                {
                    "key": "geographic location (elevation)",
                    "value": "0",
                    "unit": "m"
                },
                {
                    "key": "NCBI sample classification",
                    "value": "749907",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina HiSeq 2000",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ENA default sample checklist (ERC000011)",
                    "unit": null
                },
                {
                    "key": "protocol reference",
                    "value": "bottle",
                    "unit": null
                },
                {
                    "key": "sample name",
                    "value": "1_PJ3",
                    "unit": null
                },
                {
                    "key": "source name",
                    "value": "DNA",
                    "unit": null
                },
                {
                    "key": "organism",
                    "value": "water metagenome",
                    "unit": null
                }
            ],
            "latitude": -33.8731,
            "accession": "ERS462871",
            "analysis-completed": "2014-07-03",
            "collection-date": null,
            "geo-loc-name": "Australia: NSW, Sydney Harbour",
            "sample-desc": "BRAEMBL-AOM_EnvironmentalMetagenomicsSamplesSydneyHarbour-1",
            "environment-biome": "aquatic biome",
            "environment-feature": "estuary",
            "environment-material": "water",
            "sample-name": "1_PJ3",
            "sample-alias": "BRAEMBL-AOM_EnvironmentalMetagenomicsSamplesSydneyHarbour-1",
            "host-tax-id": null,
            "species": null,
            "last-update": "2016-01-01T00:05:02"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine:Intertidal zone:Estuary"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Intertidal%20zone:Estuary?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS462871/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00000391",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000391?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS462871/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS462871?format=api"
        }
    }
}