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{
"data": {
"type": "samples",
"id": "ERS437564",
"attributes": {
"biosample": "SAMEA2468004",
"longitude": -90.2571,
"latitude": 38.6371,
"sample-metadata": [
{
"key": "sex",
"value": "male",
"unit": null
},
{
"key": "investigation type",
"value": "mimarks-survey",
"unit": null
},
{
"key": "project name",
"value": "Functional characterization of mucosal IgA-targeted members of the gut microbiota of undernourished Malawian children",
"unit": null
},
{
"key": "geographic location (longitude)",
"value": "-90.2571",
"unit": null
},
{
"key": "geographic location (country and/or sea,region)",
"value": "USA",
"unit": null
},
{
"key": "collection date",
"value": "2011-01-05",
"unit": null
},
{
"key": "environment (biome)",
"value": "ENVO:01000219",
"unit": null
},
{
"key": "environment (feature)",
"value": "ENVO:01000159",
"unit": null
},
{
"key": "environment (material)",
"value": "ENVO:00002003",
"unit": null
},
{
"key": "environmental package",
"value": "host-associated",
"unit": null
},
{
"key": "sample collection device or method",
"value": "FACS sample with high IgA binding",
"unit": null
},
{
"key": "target gene",
"value": "16S rRNA",
"unit": null
},
{
"key": "target subfragment",
"value": "V2",
"unit": null
},
{
"key": "sequencing method",
"value": "pyrosequencing",
"unit": null
},
{
"key": "host common name",
"value": "mouse",
"unit": null
},
{
"key": "host taxid",
"value": "10090",
"unit": null
},
{
"key": "geographic location (latitude)",
"value": "38.63707",
"unit": null
},
{
"key": "NCBI sample classification",
"value": "10090",
"unit": null
},
{
"key": "instrument model",
"value": "454 GS FLX Titanium",
"unit": null
},
{
"key": "ENA checklist",
"value": "ERC000011",
"unit": null
},
{
"key": "host scientific name",
"value": "Mus musculus",
"unit": null
}
],
"accession": "ERS437564",
"analysis-completed": "2016-06-15",
"collection-date": "2011-01-05",
"geo-loc-name": "USA",
"sample-desc": "Experiment B: Mice humanized with fecal microbiota from twins discordant for kwashiorkor. This sample was obtained from a humanized mouse #9, 16 days after colonization with the fecal microbiota of healthy co-twin 57B. The mouse was fed a nutritionally replete BK chow diet. This sample was fractionated by sorting the IgApos fraction. Please see our paper for additional details.",
"environment-biome": "ENVO:01000219",
"environment-feature": "ENVO:01000159",
"environment-material": "ENVO:00002003",
"sample-name": "454Reads.B_57HE_N_BK_9_D16_IGAPOS",
"sample-alias": "454Reads.B_57HE_N_BK_9_D16_IGAPOS",
"host-tax-id": 9606,
"species": "Homo sapiens",
"last-update": "2024-01-09T20:10:42"
},
"relationships": {
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS437564/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001075",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001075?format=api"
}
}
]
},
"biome": {
"data": {
"type": "biomes",
"id": "root:Host-associated:Human:Digestive system"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Human:Digestive%20system?format=api"
}
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS437564/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS437564?format=api"
}
}
}