Sample Instance

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS377809",
        "attributes": {
            "longitude": 6.8562,
            "biosample": "SAMEA2270342",
            "latitude": 50.9583,
            "sample-metadata": [
                {
                    "key": "investigation type",
                    "value": "metagenome",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Arabidopsis relatives root microbiota",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "6.8561983",
                    "unit": null
                },
                {
                    "key": "geographic location (country and/or sea,region)",
                    "value": "Germany",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2010-12-03",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "plant_root-associated",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "greenhouse_replicate_1",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "Root",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "plant-associated",
                    "unit": null
                },
                {
                    "key": "multiplex identifiers",
                    "value": "ATCGAT",
                    "unit": null
                },
                {
                    "key": "sequencing method",
                    "value": "pyrosequencing",
                    "unit": null
                },
                {
                    "key": "genotype",
                    "value": "Auby",
                    "unit": null
                },
                {
                    "key": "host taxid",
                    "value": "81971",
                    "unit": null
                },
                {
                    "key": "miscellaneous parameter",
                    "value": "L28",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "50.958263",
                    "unit": null
                },
                {
                    "key": "NCBI sample classification",
                    "value": "1118232",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "454 GS FLX Titanium",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000020",
                    "unit": null
                },
                {
                    "key": "host scientific name",
                    "value": "Arabidopsis halleri subsp. halleri",
                    "unit": null
                },
                {
                    "key": "plant-associated environmental package",
                    "value": "plant-associated",
                    "unit": null
                }
            ],
            "accession": "ERS377809",
            "analysis-completed": "2016-12-14",
            "collection-date": "2010-12-03",
            "geo-loc-name": "Germany",
            "sample-desc": "Root bacterial community profile #3 from A. halleri (genotype Auby) of the greenhouse replicate experiment #1, sequenced in Library L28",
            "environment-biome": "plant_root-associated",
            "environment-feature": "greenhouse_replicate_1",
            "environment-material": "Root",
            "sample-name": "L28_r1_B4007",
            "sample-alias": "L28_r1_B4007",
            "host-tax-id": 81971,
            "species": null,
            "last-update": "2022-04-29T16:55:02"
        },
        "relationships": {
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Plants:Root"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Plants:Root?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS377809/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001349",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001349?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS377809/runs?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS377809?format=api"
        }
    }
}