GET /metagenomics/api/v1/samples/ERS3470740?format=api
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Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS3470740",
        "attributes": {
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "33.8",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "SOI2018",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "132.0818",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2018-06-01T14:00:00Z",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "ENVO:01000048",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "ENVO:00000015",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "ENVO:00002151",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "200.0",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "10.6",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "29.9179",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina MiSeq",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000027",
                    "unit": null
                },
                {
                    "key": "last update date",
                    "value": "2019-05-29",
                    "unit": null
                }
            ],
            "longitude": 132.0818,
            "biosample": "SAMEA5666729",
            "latitude": 29.9179,
            "accession": "ERS3470740",
            "analysis-completed": "2019-06-25",
            "collection-date": null,
            "geo-loc-name": null,
            "sample-desc": "Samples were obtained during the Schmidt Ocean Institute cruise Exploring Fronts With Mutiple Robots to the Pacific Ocean in 2018 (https://schmidtocean.org/cruise/exploring_fronts_with_multiple_aerial-surface-underwater-vehicles/). Water samples for microplankton analysis were collected using a multi water sampler (rosette) from the research vessel Falkor and concentrated on board in a 0.2 _m Sterivex filter. This expedition target the Subtropical Front, located approximately 1,000 nautical miles off the coast of Southern California. The study includes samples from: (i) amplicon sequencing after 18S amplification by PCR using TAReuk454FWD1/ TAReukREV3_modified primer set and (ii) amplicon sequencing after 16S amplification by PCR using 515F/926R primer set. Libraries were constructed according to Illumina Library protocol.",
            "environment-biome": "ENVO:01000048",
            "environment-feature": "ENVO:00000015",
            "environment-material": "ENVO:00002151",
            "sample-name": "6_A_18S",
            "sample-alias": "6_A_18S",
            "host-tax-id": null,
            "species": null,
            "last-update": "2024-04-11T19:47:09"
        },
        "relationships": {
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS3470740/runs?format=api"
                }
            },
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS3470740/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00005045",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005045?format=api"
                        }
                    }
                ]
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine:Oceanic"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine:Oceanic?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS3470740?format=api"
        }
    }
}