GET /metagenomics/api/v1/samples/ERS2536372/studies?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "links": {
        "first": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS2536372/studies?format=api&page=1",
        "last": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS2536372/studies?format=api&page=1",
        "next": null,
        "prev": null
    },
    "data": [
        {
            "type": "studies",
            "id": "MGYS00002413",
            "attributes": {
                "samples-count": 173,
                "bioproject": "PRJEB27188",
                "accession": "MGYS00002413",
                "is-private": false,
                "last-update": "2018-06-13T09:22:29",
                "secondary-accession": "ERP109242",
                "centre-name": "Nord University",
                "public-release-date": null,
                "study-abstract": "Prebiotics are food/feed additives intended to sculpt gut microbial communities as they are selectively utilized by the microorganisms to exert beneficial health effects on hosts. Macroalga-derived oligosaccharides are potential prebiotics, and herein, we determined the effects of Laminaria sp.-derived alginate oligosaccharide (AlgOS) on the distal intestinal microbiota of Atlantic salmon (Salmo salar). Using a high-throughput 16S rRNA gene amplicon sequencing technique, we investigated the microbiota harboured in the intestinal content and mucus of Atlantic salmon offered feeds supplemented with 0.5 and 2.5% AlgOS. We found that AlgOS shifts the intestinal microbiota profile; alpha diversity was significantly reduced with 2.5% AlgOS while with 0.5% AlgOS the alteration occurred without impacting the bacterial diversity. Beta diversity showed a significant difference between control and AlgOS-fed groups. AlgOS supplementation facilitated the dominance of Proteobacteria and Spirochaetes, promoting the growth of presumed butyrate producers in the intestine. In addition, 0.5% AlgOS stimulated certain bacteria belonging to Proteobacteria, Spirochaetes and Actinobacteria. This indicates that the low inclusion of AlgOS can plausibly induce a prebiotic effect on the distal intestinal microbiota of Atlantic salmon. These results are expected to generate further interest in the potential of macroalgae-derived oligosaccharides as prebiotics for food and feed applications.  ",
                "study-name": "Alginate oligosaccharide-induced shift in the intestinal microbiota of salmon.",
                "data-origination": "SUBMITTED"
            },
            "relationships": {
                "analyses": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002413/analyses?format=api"
                    }
                },
                "publications": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002413/publications?format=api"
                    }
                },
                "biomes": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002413/biomes?format=api"
                    },
                    "data": [
                        {
                            "type": "biomes",
                            "id": "root:Host-associated:Fish:Digestive system:Intestine",
                            "links": {
                                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fish:Digestive%20system:Intestine?format=api"
                            }
                        }
                    ]
                },
                "geocoordinates": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002413/geocoordinates?format=api"
                    }
                },
                "samples": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002413/samples?format=api"
                    }
                },
                "downloads": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002413/downloads?format=api"
                    }
                }
            },
            "links": {
                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00002413?format=api"
            }
        }
    ],
    "meta": {
        "pagination": {
            "page": 1,
            "pages": 1,
            "count": 1
        }
    }
}