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{
"data": {
"type": "samples",
"id": "ERS1871471",
"attributes": {
"biosample": "SAMEA104212453",
"longitude": 3.17,
"sample-metadata": [
{
"key": "temperature",
"value": "17.0",
"unit": null
},
{
"key": "project name",
"value": "EuroMarine Open Science Experiment (EMOSE) 2017 edition: Inter-Comparison of Marine Plankton Metagenome Analysis Methods",
"unit": null
},
{
"key": "geographic location (longitude)",
"value": "3.17",
"unit": null
},
{
"key": "collection date",
"value": "2017-05-31",
"unit": null
},
{
"key": "environment (biome)",
"value": "Westerlies Biome",
"unit": null
},
{
"key": "environment (feature)",
"value": "[SRF] surface water layer (ENVO:00010504) within the epipelagic zone (ENVO:00000209) at the top of the photic zone (ENVO:00000209)",
"unit": null
},
{
"key": "environment (material)",
"value": "water (ENVO:00002006), including particulate matter (ENVO:01000060) such as planktonic material (ENVO:01000063)",
"unit": null
},
{
"key": "environmental package",
"value": "water",
"unit": null
},
{
"key": "sample collection device or method",
"value": "high volume well pump",
"unit": null
},
{
"key": "depth",
"value": "3.0",
"unit": null
},
{
"key": "salinity",
"value": "38.0",
"unit": null
},
{
"key": "geographic location (latitude)",
"value": "42.487",
"unit": null
},
{
"key": "instrument model",
"value": "Illumina HiSeq 4000",
"unit": null
},
{
"key": "ENA checklist",
"value": "ERC000030",
"unit": null
}
],
"latitude": 42.487,
"accession": "ERS1871471",
"analysis-completed": "2017-09-04",
"collection-date": "2017-05-31",
"geo-loc-name": null,
"sample-desc": "This sample (EMOSE_N010000830) was collected on board the RV Nereis II (Observatoire Oceanologique de Banyuls), using a high volume well pump, in the context of the EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. The sampling event (EMOSE_201705310750Z_DAY2_EVENT-PUMP) occurred at position latitudeN=42.486567 and longitudeE=003.1702, on date/time=2017-05-31T07:50Z00, at a depth of 3 m. The sample material was collected in the marine biome (ENVO:00000447) targeting a [SRF] surface water layer (ENVO:00010504). The sample material was size-fractionated and prepared back in the lab using protocol [SEQ-(100L-on-membrane)_W3-20] for later detection and identification of biological and molecular entities (nucleotides) by sequencing (SEQ) methods. This sample may be used for example in biodiversity and metagenomics studies of prokaryotes and eukaryotes. This sample has replicate sample(s): EMOSE_N010000701,EMOSE_N010000699,EMOSE_N010000697,EMOSE_N010000695,EMOSE_N010000693,EMOSE_N010000691,EMOSE_N010000689,EMOSE_N010000687,EMOSE_N010000718,EMOSE_N010000703,EMOSE_N010000685",
"environment-biome": "Westerlies Biome",
"environment-feature": "[SRF] surface water layer (ENVO:00010504) within the epipelagic zone (ENVO:00000209) at the top of the photic zone (ENVO:00000209)",
"environment-material": "water (ENVO:00002006), including particulate matter (ENVO:01000060) such as planktonic material (ENVO:01000063)",
"sample-name": "EMOSE_N010000830",
"sample-alias": "EMOSE_N010000830",
"host-tax-id": null,
"species": null,
"last-update": "2021-07-26T12:27:51"
},
"relationships": {
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Aquatic:Marine"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1871471/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001935",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001935?format=api"
}
},
{
"type": "studies",
"id": "MGYS00003954",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00003954?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1871471/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1871471?format=api"
}
}
}