HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"data": {
"type": "samples",
"id": "ERS1871443",
"attributes": {
"longitude": 3.17,
"biosample": "SAMEA104212425",
"latitude": 42.487,
"sample-metadata": [
{
"key": "temperature",
"value": "17.0",
"unit": null
},
{
"key": "project name",
"value": "EuroMarine Open Science Experiment (EMOSE) 2017 edition: Inter-Comparison of Marine Plankton Metagenome Analysis Methods",
"unit": null
},
{
"key": "geographic location (longitude)",
"value": "3.17",
"unit": null
},
{
"key": "collection date",
"value": "2017-05-31",
"unit": null
},
{
"key": "environment (biome)",
"value": "Westerlies Biome",
"unit": null
},
{
"key": "environment (feature)",
"value": "[SRF] surface water layer (ENVO:00010504) within the epipelagic zone (ENVO:00000209) at the top of the photic zone (ENVO:00000209)",
"unit": null
},
{
"key": "environment (material)",
"value": "water (ENVO:00002006), including particulate matter (ENVO:01000060) such as planktonic material (ENVO:01000063)",
"unit": null
},
{
"key": "environmental package",
"value": "water",
"unit": null
},
{
"key": "sample collection device or method",
"value": "high volume well pump",
"unit": null
},
{
"key": "depth",
"value": "3.0",
"unit": null
},
{
"key": "salinity",
"value": "38.0",
"unit": null
},
{
"key": "geographic location (latitude)",
"value": "42.487",
"unit": null
},
{
"key": "instrument model",
"value": "Illumina HiSeq 2500",
"unit": null
},
{
"key": "ENA checklist",
"value": "ERC000030",
"unit": null
}
],
"accession": "ERS1871443",
"analysis-completed": "2017-09-04",
"collection-date": "2017-05-31",
"geo-loc-name": null,
"sample-desc": "This sample (EMOSE_N020000684) was created in silico using samples EMOSE_N010000684, EMOSE_N010000686, EMOSE_N010000688, EMOSE_N010000692, EMOSE_N010000690, EMOSE_N010000694, EMOSE_N030000828, EMOSE_N010000698, EMOSE_N010000700 and EMOSE_N010000702. The latter samples were collected on board the RV Nereis II (Observatoire Oceanologique de Banyuls), using a high volume well pump, in the context of the EMOSE (2017) Inter-Comparison of Marine Plankton Metagenome Analysis Methods. The sampling event (EMOSE_201705310750Z_DAY2_EVENT-PUMP) occurred at position latitudeN=42.486567 and longitudeE=003.1702, on date/time=2017-05-31T07:50Z00, at a depth of 3 m. The sample material was collected in the marine biome (ENVO:00000447) targeting a [SRF] surface water layer (ENVO:00010504). The sample material was size-fractionated and prepared back in the lab using protocol [SEQ-(100L-on-membrane)_W0.22-3] for later detection and identification of biological and molecular entities (nucleotides) by sequencing (SEQ) methods. The pooled samples were extracted separately and parts of the DNA from each replicate were pooled before sequencing. This sample may be used for example in biodiversity and metagenomics studies of prokaryotes and eukaryotes. This sample has replicate sample(s): none",
"environment-biome": "Westerlies Biome",
"environment-feature": "[SRF] surface water layer (ENVO:00010504) within the epipelagic zone (ENVO:00000209) at the top of the photic zone (ENVO:00000209)",
"environment-material": "water (ENVO:00002006), including particulate matter (ENVO:01000060) such as planktonic material (ENVO:01000063)",
"sample-name": "EMOSE_N020000684",
"sample-alias": "EMOSE_N020000684",
"host-tax-id": null,
"species": null,
"last-update": "2021-07-26T13:19:28"
},
"relationships": {
"biome": {
"data": {
"type": "biomes",
"id": "root:Environmental:Aquatic:Marine"
},
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
}
},
"studies": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1871443/studies?format=api"
},
"data": [
{
"type": "studies",
"id": "MGYS00001935",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001935?format=api"
}
},
{
"type": "studies",
"id": "MGYS00003954",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00003954?format=api"
}
}
]
},
"runs": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1871443/runs?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1871443?format=api"
}
}
}