GET /metagenomics/api/v1/samples/ERS1092158?format=api
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Vary: Accept

{
    "data": {
        "type": "samples",
        "id": "ERS1092158",
        "attributes": {
            "longitude": 2.7996,
            "biosample": "SAMEA3905024",
            "latitude": 41.6686,
            "sample-metadata": [
                {
                    "key": "temperature",
                    "value": "99999.0",
                    "unit": null
                },
                {
                    "key": "project name",
                    "value": "Tara Oceans expedition (2009-2013)",
                    "unit": null
                },
                {
                    "key": "geographic location (longitude)",
                    "value": "2.7996",
                    "unit": null
                },
                {
                    "key": "collection date",
                    "value": "2009-10-04",
                    "unit": null
                },
                {
                    "key": "environment (biome)",
                    "value": "marine biome (ENVO:00000447)",
                    "unit": null
                },
                {
                    "key": "environment (feature)",
                    "value": "surface water layer (ENVO:00010504)",
                    "unit": null
                },
                {
                    "key": "environment (material)",
                    "value": "water (ENVO:00002006), including particulate matter (ENVO:01000060) such as planktonic material (ENVO:01000063)",
                    "unit": null
                },
                {
                    "key": "environmental package",
                    "value": "water",
                    "unit": null
                },
                {
                    "key": "sample collection device or method",
                    "value": "high volume peristaltic pump [HVP-PUMP]",
                    "unit": null
                },
                {
                    "key": "depth",
                    "value": "5",
                    "unit": null
                },
                {
                    "key": "salinity",
                    "value": "99999.0",
                    "unit": null
                },
                {
                    "key": "geographic location (latitude)",
                    "value": "41.6686",
                    "unit": null
                },
                {
                    "key": "instrument model",
                    "value": "Illumina HiSeq 2000",
                    "unit": null
                },
                {
                    "key": "ENA checklist",
                    "value": "ERC000030",
                    "unit": null
                }
            ],
            "accession": "ERS1092158",
            "analysis-completed": "2018-10-04",
            "collection-date": "2009-10-04",
            "geo-loc-name": null,
            "sample-desc": "This sample (TARA_X100000009) was collected at station TARA_011 during campaign TARA_20090926Z of the Tara Oceans expedition (2009-2013), using a high volume peristaltic pump [HVP-PUMP]. The sampling event (TARA_20091004T0830Z_011_EVENT_PUMP) occurred at position latitudeN=41.6686 and longitudeE=2.7996, on date/time=2009-10-04T08:30, at a depth of 3-7 m. The sample material was collected in the marine biome (ENVO:00000447) targeting a [SRF] surface water layer (ENVO:00010504). The sample material was size-fractionated (- micrometres) and prepared on board using protocol [SEQ-(10L-or-15min)_W0.22-1.6] for later detection and identification of biological and molecular entities (nucleotides) by sequencing (SEQ) methods. This sample has replicate sample(s): TARA_X100000008.",
            "environment-biome": "marine biome (ENVO:00000447)",
            "environment-feature": "surface water layer (ENVO:00010504)",
            "environment-material": "water (ENVO:00002006), including particulate matter (ENVO:01000060) such as planktonic material (ENVO:01000063)",
            "sample-name": "TARA_X100000009",
            "sample-alias": "TARA_X100000009",
            "host-tax-id": null,
            "species": null,
            "last-update": "2023-09-27T18:15:29"
        },
        "relationships": {
            "studies": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1092158/studies?format=api"
                },
                "data": [
                    {
                        "type": "studies",
                        "id": "MGYS00001482",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001482?format=api"
                        }
                    },
                    {
                        "type": "studies",
                        "id": "MGYS00006075",
                        "links": {
                            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006075?format=api"
                        }
                    }
                ]
            },
            "runs": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1092158/runs?format=api"
                }
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Environmental:Aquatic:Marine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Marine?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS1092158?format=api"
        }
    }
}