GET /metagenomics/api/v1/samples/DRS009550/studies?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"links": {
"first": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/DRS009550/studies?format=api&page=1",
"last": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/DRS009550/studies?format=api&page=1",
"next": null,
"prev": null
},
"data": [
{
"type": "studies",
"id": "MGYS00005240",
"attributes": {
"samples-count": 2007,
"bioproject": "PRJDB2078",
"accession": "MGYS00005240",
"is-private": false,
"last-update": "2022-03-22T04:40:31",
"secondary-accession": "DRP001052",
"centre-name": "Graduate School of Human and Environment Studies, Kyoto University",
"public-release-date": null,
"study-abstract": "Most terrestrial plants interact with diverse clades of mycorrhizal and root-endophytic fungi in their roots. Through the below-ground plant_fungal association, dominant plants can benefit by interacting with host-specific mutualistic fungi, while subordinate plant species may persist by sharing other sets (ecotypes) of fungal symbionts with each other. Therefore, the host preference of root-associated fungi is the key to understand plant community structure and dynamics. Based on 454-pyrosequencing, we revealed the root-associated fungal community on co-occurring 36 plant species in an oak-dominated forest in northern Japan, and statistically evaluated the host preference of diverse mycorrhizal and root-endophytic fungi. The analysis of 278 fungal taxa indicated that several taxa in the ectomycorrhizal family Russulaceae and the ecologically-diverse ascomycete order Helotiales had significant host preference for the dominant oak (Quercus) species. On the other hand, arbuscular-mycorrhizal fungi were shared mainly among subordinate plant species. While these fungi with host preference contributed to compartmentalize the below-ground plant_fungal associations, diverse clades of ectomycorrhizal fungi and possible root-endophytes associated not only with the dominant Quercus but also with the remaining plant species. Our findings suggest that dominant and subordinate plant species can host different subsets of root-associated fungi, while diverse clades of generalist fungi can counterbalance the compartmentalization of plant_fungal associations. Such insights into the overall structure of plant_root-associated fungal associations will enable us to understand the mechanisms that facilitate the co-existence of plant species in natural communities.",
"study-name": "Complex community structure of ectomycorrhizal, arbuscular-mycorrhizal and root-endophytic fungi in a mixed subtropical forest of ectomycorrhizal and arbuscular-mycorrhizal plants",
"data-origination": "HARVESTED"
},
"relationships": {
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005240/analyses?format=api"
}
},
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005240/publications?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005240/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Host-associated:Plants",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Plants?format=api"
}
}
]
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005240/geocoordinates?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005240/samples?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005240/downloads?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005240?format=api"
}
}
],
"meta": {
"pagination": {
"page": 1,
"pages": 1,
"count": 1
}
}
}