GET /metagenomics/api/v1/publications/39696719/samples?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "links": {
        "first": "https://www.ebi.ac.uk/metagenomics/api/v1/publications/39696719/samples?format=api&page=1",
        "last": "https://www.ebi.ac.uk/metagenomics/api/v1/publications/39696719/samples?format=api&page=1",
        "next": null,
        "prev": null
    },
    "data": [
        {
            "type": "samples",
            "id": "ERS223618",
            "attributes": {
                "biosample": "SAMEA2163752",
                "longitude": 167.1114,
                "latitude": -77.5184,
                "sample-metadata": [
                    {
                        "key": "temperature",
                        "value": "65.0",
                        "unit": null
                    },
                    {
                        "key": "investigation type",
                        "value": "metagenome",
                        "unit": null
                    },
                    {
                        "key": "project name",
                        "value": "Novel subsurface lineages dominate fumarolic microbial communities at Tramway Ridge, Mt. Erebus, Antarctica",
                        "unit": null
                    },
                    {
                        "key": "geographic location (longitude)",
                        "value": "167.11137",
                        "unit": null
                    },
                    {
                        "key": "geographic location (depth)",
                        "value": "0.01",
                        "unit": "m"
                    },
                    {
                        "key": "geographic location (country and/or sea,region)",
                        "value": "Antarctica",
                        "unit": null
                    },
                    {
                        "key": "collection date",
                        "value": "2009-02-01",
                        "unit": null
                    },
                    {
                        "key": "environment (biome)",
                        "value": "terrestrial geothermal fumarole",
                        "unit": null
                    },
                    {
                        "key": "environment (feature)",
                        "value": "fumarole",
                        "unit": null
                    },
                    {
                        "key": "environment (material)",
                        "value": "soil",
                        "unit": null
                    },
                    {
                        "key": "environmental package",
                        "value": "sediment",
                        "unit": null
                    },
                    {
                        "key": "amount or size of sample collected",
                        "value": "0.05",
                        "unit": "L"
                    },
                    {
                        "key": "nucleic acid extraction",
                        "value": "CTAB-BME (Barrett, 2006)",
                        "unit": null
                    },
                    {
                        "key": "target gene",
                        "value": "16S rRNA",
                        "unit": null
                    },
                    {
                        "key": "sequencing method",
                        "value": "Pyrosequencing",
                        "unit": null
                    },
                    {
                        "key": "depth",
                        "value": "0.01",
                        "unit": null
                    },
                    {
                        "key": "elevation",
                        "value": "3370.0",
                        "unit": null
                    },
                    {
                        "key": "pH",
                        "value": "8.35",
                        "unit": null
                    },
                    {
                        "key": "geographic location (elevation)",
                        "value": "3370",
                        "unit": "m"
                    },
                    {
                        "key": "geographic location (latitude)",
                        "value": "-77.51838",
                        "unit": null
                    },
                    {
                        "key": "NCBI sample classification",
                        "value": "256318",
                        "unit": null
                    },
                    {
                        "key": "instrument model",
                        "value": "454 GS FLX Titanium",
                        "unit": null
                    },
                    {
                        "key": "ENA checklist",
                        "value": "ERC000021",
                        "unit": null
                    },
                    {
                        "key": "ENA-SUBMISSION-TOOL",
                        "value": "SRA-Webin",
                        "unit": null
                    },
                    {
                        "key": "sediment environmental package",
                        "value": "sediment",
                        "unit": null
                    }
                ],
                "accession": "ERS223618",
                "analysis-completed": "2017-02-13",
                "collection-date": "2009-02-01",
                "geo-loc-name": "Antarctica",
                "sample-desc": "Tramway Ridge Site A, 0-2 cm depth",
                "environment-biome": "terrestrial geothermal fumarole",
                "environment-feature": "fumarole",
                "environment-material": "soil",
                "sample-name": "ERBTW_A_0cm_2cm",
                "sample-alias": "ERBTW_A_0cm_2cm",
                "host-tax-id": null,
                "species": null,
                "last-update": "2020-11-30T10:15:43"
            },
            "relationships": {
                "studies": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS223618/studies?format=api"
                    },
                    "data": [
                        {
                            "type": "studies",
                            "id": "MGYS00001474",
                            "links": {
                                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001474?format=api"
                            }
                        },
                        {
                            "type": "studies",
                            "id": "MGYS00005667",
                            "links": {
                                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005667?format=api"
                            }
                        },
                        {
                            "type": "studies",
                            "id": "MGYS00005668",
                            "links": {
                                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005668?format=api"
                            }
                        }
                    ]
                },
                "biome": {
                    "data": {
                        "type": "biomes",
                        "id": "root:Environmental:Aquatic:Thermal springs:Hot (42-90C)"
                    },
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Thermal%20springs:Hot%20(42-90C)?format=api"
                    }
                },
                "runs": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS223618/runs?format=api"
                    }
                }
            },
            "links": {
                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS223618?format=api"
            }
        },
        {
            "type": "samples",
            "id": "ERS223619",
            "attributes": {
                "biosample": "SAMEA2163753",
                "longitude": 167.1114,
                "latitude": -77.5184,
                "sample-metadata": [
                    {
                        "key": "temperature",
                        "value": "65.0",
                        "unit": null
                    },
                    {
                        "key": "investigation type",
                        "value": "metagenome",
                        "unit": null
                    },
                    {
                        "key": "project name",
                        "value": "Novel subsurface lineages dominate fumarolic microbial communities at Tramway Ridge, Mt. Erebus, Antarctica",
                        "unit": null
                    },
                    {
                        "key": "geographic location (longitude)",
                        "value": "167.11137",
                        "unit": null
                    },
                    {
                        "key": "geographic location (depth)",
                        "value": "0.03",
                        "unit": "m"
                    },
                    {
                        "key": "geographic location (country and/or sea,region)",
                        "value": "Antarctica",
                        "unit": null
                    },
                    {
                        "key": "collection date",
                        "value": "2009-02-01",
                        "unit": null
                    },
                    {
                        "key": "environment (biome)",
                        "value": "terrestrial geothermal fumarole",
                        "unit": null
                    },
                    {
                        "key": "environment (feature)",
                        "value": "fumarole",
                        "unit": null
                    },
                    {
                        "key": "environment (material)",
                        "value": "soil",
                        "unit": null
                    },
                    {
                        "key": "environmental package",
                        "value": "sediment",
                        "unit": null
                    },
                    {
                        "key": "amount or size of sample collected",
                        "value": "0.05",
                        "unit": "L"
                    },
                    {
                        "key": "nucleic acid extraction",
                        "value": "CTAB-BME (Barrett, 2006)",
                        "unit": null
                    },
                    {
                        "key": "target gene",
                        "value": "16S rRNA",
                        "unit": null
                    },
                    {
                        "key": "sequencing method",
                        "value": "Pyrosequencing",
                        "unit": null
                    },
                    {
                        "key": "depth",
                        "value": "0.03",
                        "unit": null
                    },
                    {
                        "key": "elevation",
                        "value": "3370.0",
                        "unit": null
                    },
                    {
                        "key": "pH",
                        "value": "8.52",
                        "unit": null
                    },
                    {
                        "key": "geographic location (elevation)",
                        "value": "3370",
                        "unit": "m"
                    },
                    {
                        "key": "geographic location (latitude)",
                        "value": "-77.51838",
                        "unit": null
                    },
                    {
                        "key": "NCBI sample classification",
                        "value": "256318",
                        "unit": null
                    },
                    {
                        "key": "instrument model",
                        "value": "454 GS Junior",
                        "unit": null
                    },
                    {
                        "key": "ENA checklist",
                        "value": "ERC000021",
                        "unit": null
                    },
                    {
                        "key": "ENA-SUBMISSION-TOOL",
                        "value": "SRA-Webin",
                        "unit": null
                    },
                    {
                        "key": "sediment environmental package",
                        "value": "sediment",
                        "unit": null
                    }
                ],
                "accession": "ERS223619",
                "analysis-completed": "2017-02-13",
                "collection-date": "2009-02-01",
                "geo-loc-name": "Antarctica",
                "sample-desc": "Tramway Ridge Site A, 2-4 cm depth",
                "environment-biome": "terrestrial geothermal fumarole",
                "environment-feature": "fumarole",
                "environment-material": "soil",
                "sample-name": "ERBTW_A_2cm_4cm",
                "sample-alias": "ERBTW_A_2cm_4cm",
                "host-tax-id": null,
                "species": null,
                "last-update": "2020-11-30T10:09:05"
            },
            "relationships": {
                "studies": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS223619/studies?format=api"
                    },
                    "data": [
                        {
                            "type": "studies",
                            "id": "MGYS00001474",
                            "links": {
                                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001474?format=api"
                            }
                        },
                        {
                            "type": "studies",
                            "id": "MGYS00005667",
                            "links": {
                                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005667?format=api"
                            }
                        },
                        {
                            "type": "studies",
                            "id": "MGYS00005668",
                            "links": {
                                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005668?format=api"
                            }
                        }
                    ]
                },
                "biome": {
                    "data": {
                        "type": "biomes",
                        "id": "root:Environmental:Aquatic:Thermal springs:Hot (42-90C)"
                    },
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Aquatic:Thermal%20springs:Hot%20(42-90C)?format=api"
                    }
                },
                "runs": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS223619/runs?format=api"
                    }
                }
            },
            "links": {
                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS223619?format=api"
            }
        }
    ],
    "meta": {
        "pagination": {
            "page": 1,
            "pages": 1,
            "count": 2
        }
    }
}