HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept
{
"links": {
"first": "https://www.ebi.ac.uk/metagenomics/api/v1/publications/32661237/studies?format=api&page=1",
"last": "https://www.ebi.ac.uk/metagenomics/api/v1/publications/32661237/studies?format=api&page=1",
"next": null,
"prev": null
},
"data": [
{
"type": "studies",
"id": "MGYS00000988",
"attributes": {
"accession": "MGYS00000988",
"bioproject": "PRJNA252425",
"samples-count": 512,
"is-private": false,
"last-update": "2024-04-15T19:18:18",
"secondary-accession": "SRP043706",
"centre-name": "University of Tartu",
"public-release-date": null,
"study-abstract": "This is a global dataset of unprecedented scope to disentangle the relative roles of climatic, edaphic, floristic, and spatial variables governing global-scale patterns of soil fungal diversity. We also address key macro-ecological phenomena such as latitudinal gradients of diversity and Rapoport’s rule (expansion of species’ latitudinal range with increasing latitude) as well as cross-biome and cross-continental biogeographic relationships in multiple phylogenetic and functional groups of fungi.",
"study-name": "Global fungal diversity",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000988/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000988/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000988/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000988/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000988/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000988/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000988?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001361",
"attributes": {
"accession": "MGYS00001361",
"bioproject": "PRJEB8282",
"samples-count": 107,
"is-private": false,
"last-update": "2023-09-20T13:36:15",
"secondary-accession": "ERP009341",
"centre-name": "Natural Resources Institute Finland (Luke)",
"public-release-date": null,
"study-abstract": "Modern molecular techniques provide a comprehensive and high-resolution window into complex systems that are difficult to study with traditional macroscopic techniques. We applied culture-free DNA extraction and 454-pyrosequencing to study the fungal microflora of decaying Norway spruce (Picea abies [L.] Karst.) logs in five unmanaged boreal forests. Fungal diversity and wood density were inversely related, i.e., OTU richness generally increased as the log became increasingly decomposed. According to generalized additive mixed models white-rot fungi (e.g., Phellinus nigrolimitatus) and members of Hyphodontia did not show a clear response to the wood-density gradient, whereas Phellinus viticola and brown-rot fungi (e.g., Fomitopsis pinicola, Antrodia serialis, Coniophora olivaceae) peaked during intermediate decay and mycorrhizal fungi (e.g., Piloderma, Tylospora, Russula) increased in the later stages. This information on fungal habitat requirements facilitates development of management practices that preserve fungal diversity in managed forests.",
"study-name": "Habitat models of wood-inhabiting fungi along a decay gradient of Norway spruce logs",
"data-origination": "SUBMITTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001361/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001361/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001361/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001361/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Engineered:Solid waste:Composting:Wood",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Engineered:Solid%20waste:Composting:Wood?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001361/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001361/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001361?format=api"
}
},
{
"type": "studies",
"id": "MGYS00000737",
"attributes": {
"accession": "MGYS00000737",
"bioproject": "PRJNA175937",
"samples-count": 233,
"is-private": false,
"last-update": "2020-11-14T23:11:20",
"secondary-accession": "SRP016090",
"centre-name": "Swedish University of Agricultural Sciences",
"public-release-date": null,
"study-abstract": "This project investigates fungal communities in fine-scaled organic soil profiles in a long-term chronosequence of boreal forests. The forests are situated on 30 islands in the two lakes Hornavan and Uddjaure, in northern Sweden. The islands have burned with different frequency due to their different area to intercept lightning, and the forests represent a successional gradient ranging from 50 to 5000 years in age. The current project seeks to unravel the mechanisms for the observed long-term build-up of carbon in the organic soil profiles in the islands. It is highly relevant to increase understanding of these mechanisms to be able to adequately predict effects of climate change, forest management practices and other environmental changes on the large carbon stocks currently stored in boreal forest soils. Fungal ITS2 amplicons from organic soil profiles from boreal forest chronosequence.",
"study-name": "The Island Project - Fungal communities in boreal forest soils",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000737/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000737/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000737/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000737/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Forest soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Forest%20soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000737/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000737/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000737?format=api"
}
},
{
"type": "studies",
"id": "MGYS00005313",
"attributes": {
"accession": "MGYS00005313",
"bioproject": "PRJNA475307",
"samples-count": 626,
"is-private": false,
"last-update": "2020-05-02T02:21:10",
"secondary-accession": "SRP151262",
"centre-name": "Northwest A&F University",
"public-release-date": null,
"study-abstract": "Our study's aim was to investigate the vertical assembly of soil microbiomes at a fine scale during the successional development of restored ecosystems, and their contribution to soil ecosystem multi-nutrients cycling at subsurface profiles.",
"study-name": "Arable land and chronosequenced forest land soil from different depth Raw sequence reads",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005313/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005313/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005313/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005313/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Forest soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Forest%20soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005313/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005313/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00005313?format=api"
}
},
{
"type": "studies",
"id": "MGYS00000868",
"attributes": {
"accession": "MGYS00000868",
"bioproject": "PRJNA241432",
"samples-count": 602,
"is-private": false,
"last-update": "2019-11-07T16:52:16",
"secondary-accession": "SRP040314",
"centre-name": "Stanford University",
"public-release-date": null,
"study-abstract": "Continental scale survey of soil fungi across North America using 454 pyrosequencing and extracellular enzyme assays to assess taxonomic and functional diversity.",
"study-name": "Uncultured fungus Targeted Locus (Loci)",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000868/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000868/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000868/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000868/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Host-associated:Fungi",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fungi?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000868/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000868/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000868?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001028",
"attributes": {
"accession": "MGYS00001028",
"bioproject": "PRJNA263676",
"samples-count": 6,
"is-private": false,
"last-update": "2019-11-07T16:51:46",
"secondary-accession": "SRP048856",
"centre-name": "Manchester Metropolitan University",
"public-release-date": null,
"study-abstract": "We characterised the microbial communities in degraded moorland peat, and a variety of successful natural and managed restorations at a single site. Our hypothesis was that there is a dynamic interaction between soil microbes, edaphic factors, and vegetation in degraded peatlands which will be evidenced by changes in the soil microbial community associated with degradation and restoration. The results support our hypothesis and provide a basis to inform further studies which are needed to understand the roles of microbes in peatlands, and the impact of environmental change and management strategy upon their activities. We suggest that restoration success depends partly upon the readiness and response of below-ground microbial communities to the restoration activity, and that microbial community structure in peatlands may be diagnostic of future degradation risk or the progression of restoration.",
"study-name": "Moorland peat bacteria and fungi (16S and ITS)",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001028/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001028/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001028/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001028/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Wetlands",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Wetlands?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001028/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001028/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001028?format=api"
}
},
{
"type": "studies",
"id": "MGYS00000904",
"attributes": {
"accession": "MGYS00000904",
"bioproject": "PRJNA272577",
"samples-count": 11,
"is-private": false,
"last-update": "2019-11-07T16:51:13",
"secondary-accession": "SRP052222",
"centre-name": "MNCN-CSIC",
"public-release-date": null,
"study-abstract": "Study of the diversity of soil microorganisms (bacteria, fungi, algae) along the chronosequences settled at two different glacier forefields of Southern Hemisphere, with different and contrasting environmental conditions",
"study-name": "Glacier forefield soils Targeted Locus (Loci)",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000904/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000904/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000904/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000904/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Permafrost",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Permafrost?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000904/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000904/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000904?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001041",
"attributes": {
"accession": "MGYS00001041",
"bioproject": "PRJNA266363",
"samples-count": 48,
"is-private": false,
"last-update": "2019-11-07T16:50:14",
"secondary-accession": "SRP049544",
"centre-name": "Helmholtz Centre for Environmental Research - UFZ",
"public-release-date": null,
"study-abstract": "Central objective of this study was to analyze forest management effects on soil fungal community structure",
"study-name": "Effects of forest managements on soil fungi",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001041/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001041/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001041/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001041/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Forest soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Forest%20soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001041/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001041/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001041?format=api"
}
},
{
"type": "studies",
"id": "MGYS00000894",
"attributes": {
"accession": "MGYS00000894",
"bioproject": "PRJNA231902",
"samples-count": 56,
"is-private": false,
"last-update": "2019-11-07T16:50:02",
"secondary-accession": "SRP035356",
"centre-name": "Swedish university of agricultural sciences",
"public-release-date": null,
"study-abstract": "In this project we have used high throughput 454-pyrosequencing of ITS2 amplicons to analyse fungal communities in humus and litter from 26 old-growth boreal forests in central Sweden. The sites represent a gradient in nitrogen availability and pH, as well as different vegetation types with respect to dominant tree (Pinus sylvestris, Picea abies) and understory species.",
"study-name": "Fungal ITS2 amlicons Targeted Locus (Loci)",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000894/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000894/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000894/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000894/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Forest soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Forest%20soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000894/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000894/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000894?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001055",
"attributes": {
"accession": "MGYS00001055",
"bioproject": "PRJNA269650",
"samples-count": 77,
"is-private": false,
"last-update": "2019-11-07T16:47:21",
"secondary-accession": "SRP051033",
"centre-name": "Universite de Montreal",
"public-release-date": null,
"study-abstract": "This study aimed to wholly describe fungal diversity and community composition in a semi-closed coastal sand dune ecosystem, and to relate changes in fungi with variations in soil physiochemistry and shifts in ecosystem function at 8 different stages of succession.",
"study-name": "Dune soil fungi Metagenome",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001055/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001055/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001055/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001055/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Sand",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Sand?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001055/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001055/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001055?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001013",
"attributes": {
"accession": "MGYS00001013",
"bioproject": "PRJNA259285",
"samples-count": 1,
"is-private": false,
"last-update": "2019-11-07T16:47:11",
"secondary-accession": "SRP045746",
"centre-name": "The University of Findlay",
"public-release-date": null,
"study-abstract": "The flow of energy within an ecosystem can be considered either top-down, where predators influence consumers, or bottom-up, where producers influence consumers. Plethodon cinereus (Red-backed Salamander) is a terrestrial keystone predator who feeds on invertebrates within the ecosystem. We investigated the impact of the removal of P. cinereus on the detritivore food web in an upland deciduous forest in northwest Ohio, USA. A total of eight aluminum enclosures, each containing a single P. cinereus under a small log, were constructed in the deciduous forest. On Day 1 of the experiment, four salamanders were evicted from four of the eight enclosures. Organic matter and soil were collected from the center of each enclosure at Day 1 and Day 21. From each sample, DNA was extracted, fungal-specific amplification performed, and 454 pyrosequencing was used to sequence the nuclear ribosomal internal transcribed spacer (ITS2) region and partial ribosomal large subunit (LSU). Changes in overall fungal community composition or species diversity were not statistically significant between treatments. Statistically significant shifts in the most abundant taxonomic groups of fungi were documented in presence but not absence enclosures. We concluded that P. cinereus does not affect the overall composition or diversity of fungal communities, but does have an impact on specific groups of fungi. This study used a metagenomics-based approach to investigate a missing link among a keystone predator, P. cinereus, invertebrates, and fungal communities, all of which are critical in the detritivore food web.",
"study-name": "Soil Samples Targeted Locus (Loci)",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001013/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001013/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001013/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001013/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Loam:Forest soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Loam:Forest%20soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001013/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001013/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001013?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001005",
"attributes": {
"accession": "MGYS00001005",
"bioproject": "PRJNA257238",
"samples-count": 54,
"is-private": false,
"last-update": "2019-11-07T16:47:10",
"secondary-accession": "SRP045166",
"centre-name": "ICA-CSIC",
"public-release-date": null,
"study-abstract": "Biodiversity and climate change in european forests",
"study-name": "Fungi Metagenome",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001005/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001005/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001005/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001005/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil:Loam:Forest soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil:Loam:Forest%20soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001005/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001005/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001005?format=api"
}
},
{
"type": "studies",
"id": "MGYS00004602",
"attributes": {
"accession": "MGYS00004602",
"bioproject": "PRJNA290186",
"samples-count": 1,
"is-private": false,
"last-update": "2019-11-07T16:45:36",
"secondary-accession": "SRP061904",
"centre-name": "Kansas State University",
"public-release-date": null,
"study-abstract": "This study evaluated differences in community composition of all bacteria and fungi present in woody plant encroached streams and soils versus restored (woody plants removed) streams and soils",
"study-name": "soil bacteria and fungi Targeted loci environmental",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00004602/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00004602/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00004602/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00004602/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00004602/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00004602/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00004602?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001011",
"attributes": {
"accession": "MGYS00001011",
"bioproject": "PRJNA258435",
"samples-count": 3,
"is-private": false,
"last-update": "2019-11-07T16:44:07",
"secondary-accession": "SRP045587",
"centre-name": "Institute of Ecology and Earth Sciences",
"public-release-date": null,
"study-abstract": "Fine-scale spatial structure of belowground communities",
"study-name": "Soil Metagenome",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001011/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001011/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001011/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001011/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001011/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001011/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001011?format=api"
}
},
{
"type": "studies",
"id": "MGYS00000921",
"attributes": {
"accession": "MGYS00000921",
"bioproject": "PRJNA245065",
"samples-count": 26,
"is-private": false,
"last-update": "2019-11-07T16:43:17",
"secondary-accession": "SRP041347",
"centre-name": "majorbio",
"public-release-date": null,
"study-abstract": "The objectives of this study were 1) to reveal the bacterial community compositions in Black soils; 2) to determine which environmental factors are dominating predict the distribution of bacterial community structures; and 3) to compare the difference/similarity of bacterial communities among 26 black soils.",
"study-name": "The samples about fungi Targeted Locus (Loci)",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000921/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000921/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000921/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000921/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Environmental:Terrestrial:Soil",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Environmental:Terrestrial:Soil?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000921/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000921/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00000921?format=api"
}
},
{
"type": "studies",
"id": "MGYS00001399",
"attributes": {
"accession": "MGYS00001399",
"bioproject": "PRJNA310202",
"samples-count": 23,
"is-private": false,
"last-update": "2017-01-11T11:28:32",
"secondary-accession": "SRP069065",
"centre-name": "University of Neuchatel, Switzerland",
"public-release-date": null,
"study-abstract": "Using ITS amplicon sequencing, structure and diversity of the root-associated fungal communities of Ilex paraguariensis St. Hil (Yerba Mate) was investigated in different plantations from Argentina.",
"study-name": "Community structure and diversity of the root-associated microbiome of Ilex paraguariensis St. Hil (Yerba Mate)",
"data-origination": "HARVESTED"
},
"relationships": {
"publications": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001399/publications?format=api"
}
},
"downloads": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001399/downloads?format=api"
}
},
"samples": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001399/samples?format=api"
}
},
"biomes": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001399/biomes?format=api"
},
"data": [
{
"type": "biomes",
"id": "root:Host-associated:Plants:Root",
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Plants:Root?format=api"
}
}
]
},
"analyses": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001399/analyses?format=api"
}
},
"geocoordinates": {
"links": {
"related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001399/geocoordinates?format=api"
}
}
},
"links": {
"self": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00001399?format=api"
}
}
],
"meta": {
"pagination": {
"page": 1,
"pages": 1,
"count": 16
}
}
}