Pipeline Tool Version Instance
GET /metagenomics/api/v1/pipeline-tools/Trimmomatic/0.35?format=api
{ "data": { "type": "pipeline-tools", "id": "Trimmomatic", "attributes": { "tool-name": "Trimmomatic", "description": "A flexible read trimming tool.", "web-link": "http://www.usadellab.org/cms/?page=trimmomatic", "version": "0.35", "exe-command": "java -classpath {0}/Trimmomatic-0.35/trimmomatic-0.35.jar org.usadellab.trimmomatic.TrimmomaticSE -threads 8 -phred33 {1} {2} LEADING:3 TRAILING:3 SLIDINGWINDOW:4:15", "configuration-file": null, "notes": null }, "relationships": { "pipelines": { "data": [ { "type": "pipelines", "id": "3.0", "links": { "self": "https://www.ebi.ac.uk/metagenomics/api/v1/pipelines/3.0?format=api" } }, { "type": "pipelines", "id": "4.0", "links": { "self": "https://www.ebi.ac.uk/metagenomics/api/v1/pipelines/4.0?format=api" } }, { "type": "pipelines", "id": "4.1", "links": { "self": "https://www.ebi.ac.uk/metagenomics/api/v1/pipelines/4.1?format=api" } } ] } }, "links": { "self": "https://www.ebi.ac.uk/metagenomics/api/v1/pipeline-tools/Trimmomatic/0.35?format=api" } } }