Genome Instance

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "genomes",
        "id": "MGYG000512361",
        "attributes": {
            "genome-id": 55653,
            "geographic-origin": "North America",
            "geographic-range": [
                "North America"
            ],
            "accession": "MGYG000512361",
            "ena-genome-accession": null,
            "ena-sample-accession": "SAMEA118727146",
            "ena-study-accession": "ERP173147",
            "ncbi-genome-accession": null,
            "ncbi-sample-accession": null,
            "ncbi-study-accession": null,
            "img-genome-accession": null,
            "patric-genome-accession": null,
            "length": 2564143,
            "num-contigs": 66,
            "n-50": 114248,
            "gc-content": 58.47,
            "type": "MAG",
            "completeness": 99.99,
            "contamination": 1.51,
            "busco-completeness": null,
            "rna-5s": 0.0,
            "rna-16s": 0.0,
            "rna-23s": 0.0,
            "rna-5-8s": null,
            "rna-18s": null,
            "rna-28s": null,
            "trnas": 20.0,
            "nc-rnas": 8,
            "num-proteins": 2488,
            "eggnog-coverage": 93.89,
            "ipr-coverage": 78.66,
            "taxon-lineage": "d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium;s__Corynebacterium sp946222835",
            "num-genomes-total": 6,
            "pangenome-size": 2501,
            "pangenome-core-size": 1487,
            "pangenome-accessory-size": 1014,
            "last-update": "2025-07-25T15:14:13.920314",
            "first-created": "2025-07-25T15:14:13.917444"
        },
        "relationships": {
            "cog-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000512361/cogs?format=api"
                }
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Human:Skin"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Human:Skin?format=api"
                }
            },
            "kegg-class-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000512361/kegg-class?format=api"
                }
            },
            "antismash-geneclusters": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000512361/antismash-genecluster?format=api"
                }
            },
            "kegg-modules-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000512361/kegg-module?format=api"
                }
            },
            "catalogue": {
                "data": {
                    "type": "genome-catalogues",
                    "id": "human-skin-v1-0"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genome-catalogues/human-skin-v1-0?format=api"
                }
            },
            "downloads": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000512361/downloads?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000512361?format=api"
        }
    }
}