Genome Instance

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{
    "data": {
        "type": "genomes",
        "id": "MGYG000322653",
        "attributes": {
            "genome-id": 20405,
            "geographic-range": [
                "North America",
                "Europe",
                "Asia"
            ],
            "geographic-origin": "Europe",
            "accession": "MGYG000322653",
            "ena-genome-accession": null,
            "ena-sample-accession": "SAMEA8805626",
            "ena-study-accession": "ERP129310",
            "ncbi-genome-accession": null,
            "ncbi-sample-accession": null,
            "ncbi-study-accession": null,
            "img-genome-accession": null,
            "patric-genome-accession": null,
            "length": 3631603,
            "num-contigs": 124,
            "n-50": 43530,
            "gc-content": 38.46,
            "type": "MAG",
            "completeness": 97.46,
            "contamination": 0.0,
            "busco-completeness": null,
            "rna-5s": 0.0,
            "rna-16s": 0.0,
            "rna-23s": 0.0,
            "rna-5-8s": null,
            "rna-18s": null,
            "rna-28s": null,
            "trnas": 17.0,
            "nc-rnas": 22,
            "num-proteins": 3403,
            "eggnog-coverage": 94.77,
            "ipr-coverage": 89.98,
            "taxon-lineage": "d__Bacteria;p__Bacillota_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__UBA3402;s__UBA3402 sp002358555",
            "num-genomes-total": 170,
            "pangenome-size": 5532,
            "pangenome-core-size": 1863,
            "pangenome-accessory-size": 3669,
            "last-update": "2023-12-08T16:30:06.559381",
            "first-created": "2023-12-08T16:30:06.557012"
        },
        "relationships": {
            "catalogue": {
                "data": {
                    "type": "genome-catalogues",
                    "id": "mouse-gut-v1-0"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genome-catalogues/mouse-gut-v1-0?format=api"
                }
            },
            "downloads": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000322653/downloads?format=api"
                }
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Mammals:Digestive system:Large intestine:Fecal"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Mammals:Digestive%20system:Large%20intestine:Fecal?format=api"
                }
            },
            "antismash-geneclusters": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000322653/antismash-genecluster?format=api"
                }
            },
            "cog-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000322653/cogs?format=api"
                }
            },
            "kegg-modules-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000322653/kegg-module?format=api"
                }
            },
            "kegg-class-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000322653/kegg-class?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000322653?format=api"
        }
    }
}