GET /metagenomics/api/v1/genomes/MGYG000299653?format=api
HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "data": {
        "type": "genomes",
        "id": "MGYG000299653",
        "attributes": {
            "genome-id": 17024,
            "geographic-range": [],
            "geographic-origin": "Europe",
            "accession": "MGYG000299653",
            "ena-genome-accession": null,
            "ena-sample-accession": "SAMEA111477203",
            "ena-study-accession": "ERP141352",
            "ncbi-genome-accession": null,
            "ncbi-sample-accession": null,
            "ncbi-study-accession": null,
            "img-genome-accession": null,
            "patric-genome-accession": null,
            "length": 2382696,
            "num-contigs": 228,
            "n-50": 16575,
            "gc-content": 26.98,
            "type": "MAG",
            "completeness": 92.92,
            "contamination": 2.81,
            "busco-completeness": null,
            "rna-5s": 88.24,
            "rna-16s": 0.0,
            "rna-23s": 0.0,
            "rna-5-8s": null,
            "rna-18s": null,
            "rna-28s": null,
            "trnas": 17.0,
            "nc-rnas": 41,
            "num-proteins": 2256,
            "eggnog-coverage": 93.44,
            "ipr-coverage": 89.32,
            "taxon-lineage": "d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__JAGNZR01;s__",
            "num-genomes-total": 1,
            "pangenome-size": null,
            "pangenome-core-size": null,
            "pangenome-accessory-size": null,
            "last-update": "2023-04-26T13:32:20.974098",
            "first-created": "2023-04-26T13:32:20.971529"
        },
        "relationships": {
            "downloads": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000299653/downloads?format=api"
                }
            },
            "catalogue": {
                "data": {
                    "type": "genome-catalogues",
                    "id": "non-model-fish-gut-v2-0"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genome-catalogues/non-model-fish-gut-v2-0?format=api"
                }
            },
            "kegg-modules-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000299653/kegg-module?format=api"
                }
            },
            "kegg-class-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000299653/kegg-class?format=api"
                }
            },
            "antismash-geneclusters": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000299653/antismash-genecluster?format=api"
                }
            },
            "cog-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000299653/cogs?format=api"
                }
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Fish:Digestive system"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Fish:Digestive%20system?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000299653?format=api"
        }
    }
}