Genome Instance

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{
    "data": {
        "type": "genomes",
        "id": "MGYG000000421",
        "attributes": {
            "genome-id": 5824,
            "geographic-range": [],
            "geographic-origin": "Europe",
            "accession": "MGYG000000421",
            "ena-genome-accession": null,
            "ena-sample-accession": "ERS554239",
            "ena-study-accession": "ERP007090",
            "ncbi-genome-accession": null,
            "ncbi-sample-accession": null,
            "ncbi-study-accession": null,
            "img-genome-accession": null,
            "patric-genome-accession": null,
            "length": 1698944,
            "num-contigs": 58,
            "n-50": 68941,
            "gc-content": 26.66,
            "type": "MAG",
            "completeness": 72.08,
            "contamination": 4.19,
            "busco-completeness": null,
            "rna-5s": 88.24,
            "rna-16s": 0.0,
            "rna-23s": 0.0,
            "rna-5-8s": null,
            "rna-18s": null,
            "rna-28s": null,
            "trnas": 18.0,
            "nc-rnas": 15,
            "num-proteins": 1603,
            "eggnog-coverage": 78.67,
            "ipr-coverage": 84.47,
            "taxon-lineage": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-269;s__",
            "num-genomes-total": 1,
            "pangenome-size": null,
            "pangenome-core-size": null,
            "pangenome-accessory-size": null,
            "last-update": "2024-01-23T13:28:04.654851",
            "first-created": "2021-12-07T18:42:14.692291"
        },
        "relationships": {
            "downloads": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000000421/downloads?format=api"
                }
            },
            "catalogue": {
                "data": {
                    "type": "genome-catalogues",
                    "id": "human-gut-v2-0-2"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genome-catalogues/human-gut-v2-0-2?format=api"
                }
            },
            "kegg-modules-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000000421/kegg-module?format=api"
                }
            },
            "kegg-class-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000000421/kegg-class?format=api"
                }
            },
            "antismash-geneclusters": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000000421/antismash-genecluster?format=api"
                }
            },
            "cog-matches": {
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000000421/cogs?format=api"
                }
            },
            "biome": {
                "data": {
                    "type": "biomes",
                    "id": "root:Host-associated:Human:Digestive system:Large intestine"
                },
                "links": {
                    "related": "https://www.ebi.ac.uk/metagenomics/api/v1/biomes/root:Host-associated:Human:Digestive%20system:Large%20intestine?format=api"
                }
            }
        },
        "links": {
            "self": "https://www.ebi.ac.uk/metagenomics/api/v1/genomes/MGYG000000421?format=api"
        }
    }
}