Assembly Analysis List

HTTP 200 OK
Allow: GET, HEAD, OPTIONS
Content-Type: application/json
Vary: Accept

{
    "links": {
        "first": "https://www.ebi.ac.uk/metagenomics/api/v1/assemblies/ERZ4226318/analyses?format=api&page=1",
        "last": "https://www.ebi.ac.uk/metagenomics/api/v1/assemblies/ERZ4226318/analyses?format=api&page=1",
        "next": null,
        "prev": null
    },
    "data": [
        {
            "type": "analysis-jobs",
            "id": "MGYA00771966",
            "attributes": {
                "analysis-summary": [
                    {
                        "key": "Submitted nucleotide sequences",
                        "value": "40913"
                    },
                    {
                        "key": "Nucleotide sequences after format-specific filtering",
                        "value": "40913"
                    },
                    {
                        "key": "Nucleotide sequences after length filtering",
                        "value": "40913"
                    },
                    {
                        "key": "Nucleotide sequences after undetermined bases filtering",
                        "value": "40913"
                    },
                    {
                        "key": "Total InterProScan matches",
                        "value": "208281"
                    },
                    {
                        "key": "Predicted CDS with InterProScan match",
                        "value": "65522"
                    },
                    {
                        "key": "Reads with InterProScan match",
                        "value": "33919"
                    },
                    {
                        "key": "Predicted LSU sequences",
                        "value": "75"
                    },
                    {
                        "key": "Predicted SSU sequences",
                        "value": "51"
                    },
                    {
                        "key": "Predicted CDS",
                        "value": "95716"
                    },
                    {
                        "key": "Reads with predicted CDS",
                        "value": "40769"
                    },
                    {
                        "key": "Reads with predicted RNA",
                        "value": "820"
                    }
                ],
                "analysis-status": "completed",
                "accession": "MGYA00771966",
                "pipeline-version": "5.0",
                "experiment-type": "assembly",
                "is-private": false,
                "last-update": "2024-05-20T20:20:26.750383",
                "mgx-accession": null,
                "complete-time": "2024-05-20T20:20:25",
                "instrument-platform": "ILLUMINA",
                "instrument-model": "Illumina NovaSeq 6000"
            },
            "relationships": {
                "taxonomy-itsonedb": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/taxonomy/itsonedb?format=api"
                    }
                },
                "assembly": {
                    "data": {
                        "type": "assemblies",
                        "id": "ERZ4226318"
                    },
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/assemblies/ERZ4226318?format=api"
                    }
                },
                "taxonomy-itsunite": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/taxonomy/unite?format=api"
                    }
                },
                "downloads": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/downloads?format=api"
                    }
                },
                "genome-properties": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/genome-properties?format=api"
                    }
                },
                "sample": {
                    "data": {
                        "type": "samples",
                        "id": "ERS5748800"
                    },
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/samples/ERS5748800?format=api"
                    }
                },
                "taxonomy": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/taxonomy?format=api"
                    }
                },
                "go-slim": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/go-slim?format=api"
                    }
                },
                "go-terms": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/go-terms?format=api"
                    }
                },
                "interpro-identifiers": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/interpro-identifiers?format=api"
                    }
                },
                "antismash-gene-clusters": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/antismash-gene-clusters?format=api"
                    }
                },
                "study": {
                    "data": {
                        "type": "studies",
                        "id": "MGYS00006069"
                    },
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/studies/MGYS00006069?format=api"
                    }
                },
                "run": {
                    "data": null
                },
                "taxonomy-ssu": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/taxonomy/ssu?format=api"
                    }
                },
                "taxonomy-lsu": {
                    "links": {
                        "related": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966/taxonomy/lsu?format=api"
                    }
                }
            },
            "links": {
                "self": "https://www.ebi.ac.uk/metagenomics/api/v1/analyses/MGYA00771966?format=api"
            }
        }
    ],
    "meta": {
        "pagination": {
            "page": 1,
            "pages": 1,
            "count": 1
        }
    }
}